F-group (family)
2002.1.1.33 Glyco_hydro_20
Ligands and drugs
324
Member domains
185
with ligand contacts (≤ 4 Å)
57.1% of members
143
with DrugDomain annotations
44.1% of members
83
with a DrugBank compound
25.6% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2002.1.1.33 belongs to X-group 2002 TIM beta/alpha-barrel, which binds 8.7 ligand superclasses per 20 proteins, broader than 71% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00141 | NAG | N-Acetylglucosamine | 30 |
| DB03747 | NGT | N-Acetyl-glucosamine thiazoline | 10 |
| DB02813 | GDL | 2-Acetamido-2-Deoxy-D-Glucono-1,5-Lactone | 6 |
| DB00205 | CP6 | Pyrimethamine | 2 |
| DB03709 | BCN | Bicine | 2 |
| DB02175 | MLA | Malonic acid | 1 |
| DB02736 | ACM | Acetamide | 1 |
| DB03740 | NDG | N-acetyl-alpha-D-glucosamine | 1 |
| DB03861 | IFG | (2R,3R,4S,5R)-2-acetamido-3,4-dihydroxy-5-hydroxymethyl-piperidine | 1 |
| DB04115 | BER | Berberine | 1 |
| DB04119 | TBR | Hexatantalum Dodecabromide | 1 |
| DB04332 | ETE | 2-{2-[2-2-(Methoxy-Ethoxy)-Ethoxy]-Ethoxy}-Ethanol | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| NAG | 2-acetamido-2-deoxy-beta-D-glucopyranose | 30 |
| NGT | 3AR,5R,6S,7R,7AR-5-HYDROXYMETHYL-2-METHYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D]THIAZOLE-6,7-DIOL | 21 |
| MGmetal | MAGNESIUM ION | 14 |
| CL | CHLORIDE ION | 13 |
| OAN | O-(2-ACETAMIDO-2-DEOXY D-GLUCOPYRANOSYLIDENE) AMINO-N-PHENYLCARBAMATE | 13 |
| ZNmetal | ZINC ION | 13 |
| GAL | beta-D-galactopyranose | 9 |
| GC2 | 6-ACETAMIDO-6-DEOXY-CASTANOSPERMINE | 8 |
| GDL | 2-(acetylamido)-2-deoxy-D-glucono-1,5-lactone | 6 |
| LOG | N-acetylglucosaminono-1,5-lactone (Z)-oxime | 5 |
| NGW | (2S,3aR,5R,6S,7R,7aR)-5-(hydroxymethyl)-2-methyl-2,3a,5,6,7,7a-hexahydro-1H-pyrano[3,2-d][1,3]thiazole-6,7-diol | 5 |
| Q4Z | [(3~{a}~{R},5~{R},6~{S},7~{R},7~{a}~{R})-2-methyl-6,7-bis(oxidanyl)-5,6,7,7~{a}-tetrahydro-3~{a}~{H}-pyrano[3,2-d][1,3]oxazol-1-ium-5-yl]methyl sulfate | 5 |
| NAmetal | SODIUM ION | 4 |
| NGA | 2-acetamido-2-deoxy-beta-D-galactopyranose | 4 |
| NGS | 2-acetamido-2-deoxy-6-O-sulfo-beta-D-glucopyranose | 4 |
| CUmetal | COPPER (II) ION | 3 |
| IFG | (2R,3R,4S,5R)-2-ACETAMIDO-3,4-DIHYDROXY-5-HYDROXYMETHYL-PIPERIDINE | 3 |
| NImetal | NICKEL (II) ION | 3 |
| NOK | 2-ACETAMIDO-1,2-DIDEOXYNOJIRMYCIN | 3 |
| 4WS | N-{[(1R,2R,3R,7S,7aR)-1,2,7-trihydroxyhexahydro-1H-pyrrolizin-3-yl]methyl}acetamide | 2 |