F-group (family)
2002.1.1.39 Glyco_hydro_3
Ligands and drugs
756
Member domains
334
with ligand contacts (≤ 4 Å)
44.2% of members
279
with DrugDomain annotations
36.9% of members
224
with a DrugBank compound
29.6% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2002.1.1.39 belongs to X-group 2002 TIM beta/alpha-barrel, which binds 8.7 ligand superclasses per 20 proteins, broader than 71% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00141 | NAG | N-Acetylglucosamine | 104 |
| DB02379 | BGC | Beta-D-Glucose | 43 |
| DB03206 | NOJ | Duvoglustat | 4 |
| DB03740 | NDG | N-acetyl-alpha-D-glucosamine | 4 |
| DB03990 | LAM | 4'-nitrophenyl-3i-thiolaminaritrioside | 4 |
| DB04545 | IFM | Afegostat | 4 |
| DB09419 | XLS | Xylose | 4 |
| DB04564 | LGC | Gluconolactone | 3 |
| DB01816 | CTS | Castanospermine | 2 |
| DB02862 | IDD | Gluco-Phenylimidazole | 2 |
| DB03434 | MPO | 3-(N-morpholino)propanesulfonic acid | 2 |
| DB04282 | G2F | 2-deoxy-2-fluoro-α-D-glucose | 2 |
| DB04447 | DTT | 1,4-Dithiothreitol | 2 |
| DB04658 | CGB | Calystegine B2 | 2 |
| DB08357 | P4G | Diethylene glycol diethyl ether | 2 |
| DB01638 | SOR | Sorbitol | 1 |
| DB04712 | IDE | ANILINOMETHYL GLUCO-PHENYLIMIDAZOLE | 1 |
| DB07432 | NP6 | [[(3R,4R,5S,6R)-3-(butanoylamino)-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-ylidene]amino] N-phenylcarbamate | 1 |
| DB08558 | SOG | 2-HYDROXYMETHYL-6-OCTYLSULFANYL-TETRAHYDRO-PYRAN-3,4,5-TRIOL | 1 |
| DB08704 | VPU | [[(3R,4R,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-(pentanoylamino)oxan-2-ylidene]amino] N-phenylcarbamate | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| NAG | 2-acetamido-2-deoxy-beta-D-glucopyranose | 121 |
| BGC | beta-D-glucopyranose | 57 |
| ZNmetal | ZINC ION | 24 |
| NAmetal | SODIUM ION | 16 |
| CL | CHLORIDE ION | 14 |
| MRD | (4R)-2-METHYLPENTANE-2,4-DIOL | 13 |
| BKR | Deacetyltaxol | 12 |
| XYP | beta-D-xylopyranose | 7 |
| C76 | 2,2,2-tris(fluoranyl)-N-[(2R,3R,4R,5S,6R)-6-(hydroxymethyl)-2,4,5-tris(oxidanyl)oxan-3-yl]ethanamide | 6 |
| CAmetal | CALCIUM ION | 6 |
| MGmetal | MAGNESIUM ION | 6 |
| GLC | alpha-D-glucopyranose | 5 |
| OAN | O-(2-ACETAMIDO-2-DEOXY D-GLUCOPYRANOSYLIDENE) AMINO-N-PHENYLCARBAMATE | 5 |
| CDmetal | CADMIUM ION | 4 |
| IFM | 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE | 4 |
| LAM | 4'-NITROPHENYL-S-(BETA-D-GLUCOPYRANOSYL)-(1-3)-(3-THIO-BETA-D-GLUCOPYRANOSYL)-(1-3)-BETA-D-GLUCOPYRANOSIDE | 4 |
| LGC | D-glucono-1,5-lactone | 4 |
| NDG | 2-acetamido-2-deoxy-alpha-D-glucopyranose | 4 |
| NOJ | 1-DEOXYNOJIRIMYCIN | 4 |
| NOK | 2-ACETAMIDO-1,2-DIDEOXYNOJIRMYCIN | 4 |