ECOD
F-group (family)

2002.1.1.58 Glyco_hydro_39

Open in classification tree →Pfam PF01229 →

Ligands and drugs

79
Member domains
52
with ligand contacts (≤ 4 Å)
65.8% of members
50
with DrugDomain annotations
63.3% of members
37
with a DrugBank compound
46.8% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 2002.1.1.58 belongs to X-group 2002 TIM beta/alpha-barrel, which binds 8.7 ligand superclasses per 20 proteins, broader than 71% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB00141NAGN-Acetylglucosamine20
DB09459TLAL-tartaric acid12
DB03389XYSalpha-D-Xylopyranose8
DB02945IDRalpha-L-iduronic acid4
DB14756SRTmeso-Tartaric acid2

Most frequently bound compounds

PDB ligandNameDomains in contact
NAG2-acetamido-2-deoxy-beta-D-glucopyranose20
CLCHLORIDE ION17
TLAL(+)-TARTARIC ACID11
NAmetalSODIUM ION9
XYSalpha-D-xylopyranose8
CAmetalCALCIUM ION7
DFX1,5-anhydro-2-deoxy-2-fluoro-D-xylitol4
IDRalpha-L-idopyranuronic acid4
XYPbeta-D-xylopyranose3
ANX2,5-DINITROPHENOL2
FIF2,6-anhydro-5-deoxy-5-fluoro-L-idonic acid2
H62(1~{R},2~{R},3~{R},4~{S},6~{S})-6-azanyl-2,3,4-tris(oxidanyl)cyclohexane-1-carboxylic acid2
H6B(1~{R},2~{R},3~{R},4~{S},5~{S},6~{R})-7-methyl-3,4,5-tris(oxidanyl)-7-azabicyclo[4.1.0]heptane-2-carboxylic acid2
IDF5-fluoro-alpha-L-idopyranosyluronic acid fluoride2
IDJ(2R,3R,4R,5S)-3,4,5-trihydroxypiperidine-2-carboxylic acid2
SRTS,R MESO-TARTARIC ACID2
8U8(2~{R},3~{S},4~{S},5~{R},6~{S})-6-(4-methyl-2-oxidanylidene-chromen-7-yl)oxy-3,4,5-tris(oxidanyl)oxane-2-carboxylic acid1
PO3PHOSPHITE ION1