F-group (family)
2002.1.1.87 Melibiase
Ligands and drugs
117
Member domains
59
with ligand contacts (≤ 4 Å)
50.4% of members
32
with DrugDomain annotations
27.4% of members
28
with a DrugBank compound
23.9% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2002.1.1.87 belongs to X-group 2002 TIM beta/alpha-barrel, which binds 8.7 ligand superclasses per 20 proteins, broader than 71% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB05018 | DGJ | Migalastat | 4 |
| DB09459 | TLA | L-tartaric acid | 2 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CL | CHLORIDE ION | 15 |
| ZNmetal | ZINC ION | 15 |
| COmetal | COBALT (II) ION | 10 |
| MGmetal | MAGNESIUM ION | 8 |
| A1AHC | 4-nitrophenyl 2-amino-2-deoxy-alpha-D-galactopyranoside | 5 |
| TLA | L(+)-TARTARIC ACID | 5 |
| DGJ | (2R,3S,4R,5S)-2-(hydroxymethyl)piperidine-3,4,5-triol | 4 |
| VQX | 8-azido-1-((1S,2S,3S,4S,5R,6S)-2,3,4-trihydroxy-5-(hydroxymethyl)-7-azabicyclo[4.1.0]heptan-7-yl)octan-1-one | 4 |
| 9PG | 4-nitrophenyl alpha-D-galactopyranoside | 3 |
| GLA | alpha-D-galactopyranose | 3 |
| 7D0 | (1~{R},2~{S},3~{S},4~{R},5~{S},6~{S})-5-[3,5-bis(fluoranyl)phenoxy]-1-(hydroxymethyl)bicyclo[4.1.0]heptane-2,3,4-triol | 1 |
| 7D2 | (1~{R},2~{S},3~{S},4~{S},5~{S},6~{S})-1-(hydroxymethyl)bicyclo[4.1.0]heptane-2,3,4,5-tetrol | 1 |
| 7D8 | (1~{R},2~{S},3~{S},4~{S},6~{R})-4-fluoranyl-1-(hydroxymethyl)bicyclo[4.1.0]heptane-2,3-diol | 1 |
| F9W | (1~{R},2~{S},3~{S},6~{S})-6-[3,5-bis(fluoranyl)phenoxy]-4-(hydroxymethyl)cyclohex-4-ene-1,2,3-triol | 1 |
| FDK | (1~{S},2~{S},3~{S},4~{S})-5-(hydroxymethyl)cyclohex-5-ene-1,2,3,4-tetrol | 1 |
| FEK | (1~{S},2~{S},3~{S})-3-fluoranyl-6-(hydroxymethyl)cyclohex-5-ene-1,2,4-triol | 1 |
| FEQ | (1~{S},2~{S},5~{S},6~{R})-5-(2,4-dinitrophenoxy)-6-fluoranyl-3-(hydroxymethyl)cyclohex-3-ene-1,2-diol | 1 |
| FH2 | (1~{S},2~{S},3~{S},4~{S})-3-fluoranyl-6-(hydroxymethyl)cyclohex-5-ene-1,2,4-triol | 1 |
| GAL | beta-D-galactopyranose | 1 |
| NAmetal | SODIUM ION | 1 |