F-group (family)
2004.1.1.109 PPK2
Ligands and drugs
124
Member domains
88
with ligand contacts (≤ 4 Å)
71.0% of members
75
with DrugDomain annotations
60.5% of members
66
with a DrugBank compound
53.2% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2004.1.1.109 belongs to X-group 2004 P-loop domains-like, which binds 7.5 ligand superclasses per 20 proteins, narrower than 53% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB16833 | ADP | Adenosine disphosphate | 19 |
| DB00171 | ATP | ATP | 14 |
| DB00131 | AMP | Adenosine phosphate | 7 |
| DB04160 | PPV | Pyrophosphoric acid | 6 |
| DB03896 | 3PO | Triphosphoric acid | 2 |
| DB14756 | SRT | meso-Tartaric acid | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 23 |
| ADP | ADENOSINE-5'-DIPHOSPHATE | 20 |
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 14 |
| CL | CHLORIDE ION | 10 |
| AMP | ADENOSINE MONOPHOSPHATE | 8 |
| PPV | PYROPHOSPHATE | 7 |
| 6YW | [oxidanyl-[oxidanyl-[oxidanyl(phosphonooxy)phosphoryl]oxy-phosphoryl]oxy-phosphoryl] phosphono hydrogen phosphate | 5 |
| 6YZ | [[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-[[oxidanyl-[oxidanyl(phosphonooxy)phosphoryl]oxy-phosphoryl]methyl]phosphinic acid | 4 |
| 9PI | bis[oxidanyl-[oxidanyl-[oxidanyl(phosphonooxy)phosphoryl]oxy-phosphoryl]oxy-phosphoryl] hydrogen phosphate | 4 |
| 6YX | [oxidanyl-[oxidanyl-[oxidanyl-[oxidanyl-[oxidanyl-[oxidanyl-[oxidanyl-[oxidanyl-[oxidanyl-[oxidanyl-[oxidanyl-[oxidanyl-[oxidanyl-[oxidanyl-[oxidanyl-[oxidanyl-[oxidanyl-[oxidanyl-[oxidanyl-[oxidanyl-[oxidanyl(phosphonooxy)phosphoryl]oxy-phosphoryl]oxy-phosphoryl]oxy-phosphoryl]oxy-phosphoryl]oxy-phosphoryl]oxy-phosphoryl]oxy-phosphoryl]oxy-phosphoryl]oxy-phosphoryl]oxy-phosphoryl]oxy-phosphoryl]oxy-phosphoryl]oxy-phosphoryl]oxy-phosphoryl]oxy-phosphoryl]oxy-phosphoryl]oxy-phosphoryl]oxy-phosphoryl]oxy-phosphoryl]oxy-phosphoryl] phosphono hydrogen phosphate | 2 |
| 6YY | bis[oxidanyl-[oxidanyl-[oxidanyl-[oxidanyl(phosphonooxy)phosphoryl]oxy-phosphoryl]oxy-phosphoryl]oxy-phosphoryl] hydrogen phosphate | 2 |
| 3PO | TRIPHOSPHATE | 1 |
| 7TT | Tetraphosphate | 1 |
| BEZ | BENZOIC ACID | 1 |
| BKP | 5'-O-[(S)-hydroxy{[(S)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]oxy}phosphoryl]guanosine | 1 |
| BOY | [(R)-hydroxy(4-methylphenyl)methyl]phosphonic acid | 1 |
| BWJ | {[(3,5-dichlorophenyl)amino]methylene}bis(phosphonic acid) | 1 |
| C8A | {[(4-benzylphenyl)amino]methylene}bis(phosphonic acid) | 1 |
| DPO | DIPHOSPHATE | 1 |
| POP | PYROPHOSPHATE 2- | 1 |