F-group (family)

2006.1.5.1 Arginase

Open in classification tree →Pfam PF00491 →

Ligands and drugs

1,048

Member domains

637

with ligand contacts (≤ 4 Å)

60.8% of members

586

with DrugDomain annotations

55.9% of members

278

with a DrugBank compound

26.5% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 2006.1.5.1 belongs to X-group 2006 HAD domain-like, which binds 9.7 ligand superclasses per 20 proteins, broader than 91% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBank	PDB ligand	Name	Domains
DB00129	ORN	Ornithine	44
DB01983	ABH	2(S)-Amino-6-Boronohexanoic Acid	29
DB00536	GAI	Guanidine	27
DB03345	BME	Mercaptoethanol	26
DB03731	S2C	S-2-(Boronoethyl)-L-Cysteine	21
DB00123	LYS	Lysine	17
DB03144	HAR	N(5)-[(hydroxyamino)(imino)methyl]-L-ornithine	11
DB03260	16D	Hexamethylene diamine	11
DB00125	ARG	Arginine	10
DB02381	NNH	nor-NOHA	10
DB03904	URE	Urea	10
DB00161	VAL	Valine	7
DB02499	DIR	Dinor-N(Omega)-Hydroxy-L-Arginine	4
DB02689	SDC	S-{2-[Amino(Dihydroxy)-Lambda~4~-Sulfanyl]Ethyl}-D-Cysteine	4
DB04197	AHI	Descarboxy-nor-N(Omega)-Hydroxy-L-Arginine	4
DB04585	2BH	DEHYDRO-2(S)-AMINO-6-BORONOHEXANOIC ACID	4
DB03085	GOA	Glycolic acid	3
DB03709	BCN	Bicine	2
DB03856	DMO	L-Eflornithine	2
DB04185	NVA	Norvaline	2

Most frequently bound compounds

PDB ligand	Name	Domains in contact
MNmetal	MANGANESE (II) ION	572
ORN	L-ornithine	48
NAmetal	SODIUM ION	36
ABH	2(S)-AMINO-6-BORONOHEXANOIC ACID	29
GAI	GUANIDINE	27
NImetal	NICKEL (II) ION	27
BME	BETA-MERCAPTOETHANOL	26
CL	CHLORIDE ION	24
S2C	S-2-(BORONOETHYL)-L-CYSTEINE	21
MGmetal	MAGNESIUM ION	20
BEN	BENZAMIDINE	18
CAmetal	CALCIUM ION	13
16D	HEXANE-1,6-DIAMINE	12
URE	UREA	12
ZNmetal	ZINC ION	12
HAR	N-OMEGA-HYDROXY-L-ARGININE	11
LYS	LYSINE	11
COmetal	COBALT (II) ION	10
NNH	NOR-N-OMEGA-HYDROXY-L-ARGININE	10
X7A	[(5R)-5-amino-5-carboxy-7-(piperidin-1-yl)heptyl](trihydroxy)borate(1-)	10