F-group (family)
2006.1.5.2 Hist_deacetyl
Ligands and drugs
1,208
Member domains
842
with ligand contacts (≤ 4 Å)
69.7% of members
769
with DrugDomain annotations
63.7% of members
497
with a DrugBank compound
41.1% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2006.1.5.2 belongs to X-group 2006 HAD domain-like, which binds 9.7 ligand superclasses per 20 proteins, broader than 91% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02565 | B3N | 4-(dimethylamino)-N-[7-(hydroxyamino)-7-oxoheptyl]benzamide | 53 |
| DB02546 | SHH | Vorinostat | 33 |
| DB04297 | TSN | Trichostatin A | 27 |
| DB03309 | NHE | N-cyclohexyltaurine | 24 |
| DB14981 | IHP | Phytic acid | 13 |
| DB02219 | CXS | 3-(cyclohexylamino)propanesulfonic acid | 12 |
| DB08168 | MCM | Coumarin 120 | 12 |
| DB03345 | BME | Mercaptoethanol | 7 |
| DB12985 | GOK | Quisinostat | 7 |
| DB09459 | TLA | L-tartaric acid | 6 |
| DB05223 | — | — | 5 |
| DB06176 | — | — | 5 |
| DB08613 | TFG | 2,2,2-TRIFLUORO-1-{5-[(3-PHENYL-5,6-DIHYDROIMIDAZO[1,2-A]PYRAZIN-7(8H)-YL)CARBONYL]THIOPHEN-2-YL}ETHANE-1,1-DIOL | 5 |
| DB02078 | PG5 | Triglyme | 4 |
| DB07553 | CF3 | 9,9,9-TRIFLUORO-8-OXO-N-PHENYLNONANAMIDE | 4 |
| DB08505 | S17 | methyl 4-bromo-N-[8-(hydroxyamino)-8-oxooctanoyl]-L-phenylalaninate | 4 |
| DB12392 | P7D | Resminostat | 4 |
| DB01593 | — | — | 3 |
| DB07350 | AGE | (2E)-N-hydroxy-3-[1-methyl-4-(phenylacetyl)-1H-pyrrol-2-yl]prop-2-enamide | 3 |
| DB07879 | HA3 | N-hydroxy-5-[(3-phenyl-5,6-dihydroimidazo[1,2-a]pyrazin-7(8H)-yl)carbonyl]thiophene-2-carboxamide | 3 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ZNmetal | ZINC ION | 832 |
| Kmetal | POTASSIUM ION | 657 |
| NAmetal | SODIUM ION | 126 |
| CAmetal | CALCIUM ION | 98 |
| B3N | 4-(dimethylamino)-N-[7-(hydroxyamino)-7-oxoheptyl]benzamide | 53 |
| SHH | OCTANEDIOIC ACID HYDROXYAMIDE PHENYLAMIDE | 35 |
| MGmetal | MAGNESIUM ION | 31 |
| TSN | TRICHOSTATIN A | 28 |
| CL | CHLORIDE ION | 22 |
| NHE | 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID | 18 |
| IOD | IODIDE ION | 14 |
| Q9C | N-{4-[(3-aminopropyl)amino]butyl}acetamide | 13 |
| CXS | 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID | 12 |
| IHP | INOSITOL HEXAKISPHOSPHATE | 12 |
| MCM | 7-AMINO-4-METHYL-CHROMEN-2-ONE | 12 |
| SP5 | N-[3-({4-[(3-aminopropyl)amino]butyl}amino)propyl]acetamide | 12 |
| 6XA | 6-amino-N-hydroxyhexanamide | 10 |
| FKS | 7-[(3-aminopropyl)amino]-1,1,1-trifluoroheptane-2,2-diol | 8 |
| GKW | 1-[(4-methoxyphenyl)methyl]-~{N}-oxidanyl-indole-6-carboxamide | 8 |
| GM5 | ~{N}-oxidanyl-3-[1-(phenylsulfanylmethyl)-1,2,3-triazol-4-yl]benzamide | 8 |