F-group (family)

2007.1.2.11 Peripla_BP_4

Open in classification tree →Pfam PF13407 →

Ligands and drugs

681

Member domains

385

with ligand contacts (≤ 4 Å)

56.5% of members

374

with DrugDomain annotations

54.9% of members

209

with a DrugBank compound

30.7% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 2007.1.2.11 belongs to X-group 2007 Flavodoxin-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 77% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBank	PDB ligand	Name	Domains
DB02379	BGC	Beta-D-Glucose	50
DB13178	INS	Inositol	34
DB04286	RIP	beta-D-Ribopyranose	30
DB04346	PAV	(2r,4s)-2-Methyl-2,3,3,4-Tetrahydroxytetrahydrofuran	16
DB03989	ALL	D-Allopyranose	12
DB03142	AHR	Alpha-L-Arabinose	8
DB03156	BDP	beta-D-glucuronic acid	4
DB11192	LTH	L-threonic acid	4
DB00128	ASP	Aspartic acid	2
DB02283	171	2-Phenylamino-Ethanesulfonic Acid	2
DB04062	FCB	beta-D-fucose	2
DB09157	CO2	Carbon dioxide	2
DB02175	MLA	Malonic acid	1
DB03309	NHE	N-cyclohexyltaurine	1
DB04122	BG6	beta-D-glucose 6-phosphate	1
DB04551	FBP	beta-D-fructofuranose 1,6-bisphosphate	1

Most frequently bound compounds

PDB ligand	Name	Domains in contact
BGC	beta-D-glucopyranose	50
INS	1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE	34
XYP	beta-D-xylopyranose	33
RIP	beta-D-ribopyranose	30
CAmetal	CALCIUM ION	27
CL	CHLORIDE ION	26
ZNmetal	ZINC ION	25
GAL	beta-D-galactopyranose	23
NAmetal	SODIUM ION	19
PAV	(2R,4S)-2-methyl-2,3,3,4-tetrahydroxytetrahydrofuran	16
ALL	beta-D-allopyranose	14
UNL	Unknown ligand	10
3VB	D-Threitol	8
AHR	alpha-L-arabinofuranose	8
SR1	5-S-methyl-5-thio-alpha-D-ribofuranose	8
T6T	alpha-D-tagatopyranose	8
GZL	beta-D-galactofuranose	6
MGmetal	MAGNESIUM ION	6
BDP	beta-D-glucopyranuronic acid	4
BDR	beta-D-ribofuranose	4