ECOD
F-group (family)

2007.1.2.13 Peripla_BP_6

Open in classification tree →Pfam PF13458 →

Ligands and drugs

351
Member domains
174
with ligand contacts (≤ 4 Å)
49.6% of members
160
with DrugDomain annotations
45.6% of members
153
with a DrugBank compound
43.6% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 2007.1.2.13 belongs to X-group 2007 Flavodoxin-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 77% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB00149LEULeucine28
DB00161VALValine16
DB07718ENO4-Hydroxyphenylpyruvic acid10
DB04242PHB4-hydroxybenzoic acid9
DB00160ALAAlanine8
DB00167ILEIsoleucine8
DB00120PHEPhenylalanine6
DB00119PYRPyruvic acid4
DB00134METMethionine4
DB00151CYSCysteine4
DB00172PROProline4
DB01762AAEAcetoacetic acid4
DB01880DHC3,4-Dihydroxycinnamic Acid4
DB02130VNLVanillic acid4
DB02343P3G3,6,9,12,15-Pentaoxaheptadecane4
DB04066HC4p-Coumaric acid4
DB158331QQalpha-Keto-isoleucine4
DB00627NIONiacin2
DB02279173Benzoylformic Acid2
DB02530ABUgamma-Aminobutyric acid2

Most frequently bound compounds

PDB ligandNameDomains in contact
LEULEUCINE28
MGmetalMAGNESIUM ION22
ILEISOLEUCINE12
VALVALINE12
CLCHLORIDE ION10
ENO3-(4-HYDROXY-PHENYL)PYRUVIC ACID10
PHBP-HYDROXYBENZOIC ACID10
ALAALANINE8
NAmetalSODIUM ION8
CAmetalCALCIUM ION6
PHEPHENYLALANINE6
1QQ(3S)-3-methyl-2-oxopentanoic acid4
3HB3-HYDROXYBENZOIC ACID4
AAEACETOACETIC ACID4
CYSCYSTEINE4
DHCCAFFEIC ACID4
HC44'-HYDROXYCINNAMIC ACID4
METMETHIONINE4
P3G3,6,9,12,15-PENTAOXAHEPTADECANE4
PCAPYROGLUTAMIC ACID4