ECOD
F-group (family)

2008.1.1.65 L_protein_N

Open in classification tree →Pfam PF15518 →

Ligands and drugs

70
Member domains
52
with ligand contacts (≤ 4 Å)
74.3% of members
51
with DrugDomain annotations
72.9% of members
14
with a DrugBank compound
20.0% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 2008.1.1.65 belongs to X-group 2008 Restriction endonuclease-like, which binds 7.5 ligand superclasses per 20 proteins, narrower than 52% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB15675E4ZBaloxavir3

Most frequently bound compounds

PDB ligandNameDomains in contact
MNmetalMANGANESE (II) ION46
CLCHLORIDE ION11
XI72-4-DIOXO-4-PHENYLBUTANOIC ACID6
0N8(2Z)-4-[1-benzyl-4-(4-chlorobenzyl)piperidin-4-yl]-2-hydroxy-4-oxobut-2-enoic acid4
11Imethyl (Z)-4-(4-(4-chlorobenzyl)-1-(2-methylbenzyl)piperidin-4-yl)-2-hydroxy-4-oxobut-2-enoate4
1I6methyl (Z)-4-(4-(4-chlorobenzyl)-1-(3-methoxybenzyl)piperidin-4-yl)-2-hydroxy-4-oxobut-2-enoate4
MN3metalMANGANESE (III) ION4
E4ZBaloxavir acid3
I0Nmethyl (Z)-4-[4-[(4-chlorophenyl)methyl]-1-(phenylmethyl)piperidin-4-yl]-2-oxidanyl-4-oxidanylidene-but-2-enoate2
A1J4F9-oxidanyl-6-[(1-phenylcyclohexyl)methyl]-2-propan-2-yl-3,4-dihydropyrazino[1,2-c]pyrimidine-1,8-dione1
I27methyl (Z)-4-[1-[(3-chlorophenyl)methyl]-4-[(4-chlorophenyl)methyl]piperidin-4-yl]-2-oxidanyl-4-oxidanylidene-but-2-enoate1
IA3methyl (Z)-4-(4-(4-chlorobenzyl)-1-(2-fluorobenzyl)piperidin-4-yl)-2-hydroxy-4-oxobut-2-enoate1
IA5methyl (Z)-4-(1-(3-bromobenzyl)-4-(4-chlorobenzyl)piperidin-4-yl)-2-hydroxy-4-oxobut-2-enoate1
U28methyl (Z)-4-(1-(3-chlorobenzyl)-4-ethylpiperidin-4-yl)-2-hydroxy-4-oxobut-2-enoate1