F-group (family)
207.2.1.20 Pectate_lyase_3
Ligands and drugs
158
Member domains
38
with ligand contacts (≤ 4 Å)
24.1% of members
31
with DrugDomain annotations
19.6% of members
26
with a DrugBank compound
16.5% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 207.2.1.20 belongs to X-group 207 Single-stranded right-handed beta-helix, which binds 6.1 ligand superclasses per 20 proteins, narrower than 73% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB04564 | LGC | Gluconolactone | 4 |
| DB00141 | NAG | N-Acetylglucosamine | 2 |
| DB02379 | BGC | Beta-D-Glucose | 2 |
| DB03309 | NHE | N-cyclohexyltaurine | 2 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| NAmetal | SODIUM ION | 11 |
| CAmetal | CALCIUM ION | 8 |
| CL | CHLORIDE ION | 6 |
| MLA | MALONIC ACID | 6 |
| ZNmetal | ZINC ION | 5 |
| LGC | D-glucono-1,5-lactone | 4 |
| MGmetal | MAGNESIUM ION | 3 |
| BGC | beta-D-glucopyranose | 2 |
| NHE | 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID | 2 |
| COmetal | COBALT (II) ION | 1 |
| NAG | 2-acetamido-2-deoxy-beta-D-glucopyranose | 1 |
| NImetal | NICKEL (II) ION | 1 |