H-group (homology)
212.1 Ribosomal protein S5 domain 2-like
Ligands and drugs
18,557
Member domains
2,847
with ligand contacts (≤ 4 Å)
15.3% of members
1,850
with DrugDomain annotations
10.0% of members
699
with a DrugBank compound
3.8% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 212.1 belongs to X-group 212 Ribosomal protein S5 domain 2-like, which binds 9.4 ligand superclasses per 20 proteins, broader than 86% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB16833 | ADP | Adenosine disphosphate | 81 |
| DB00171 | ATP | ATP | 44 |
| DB00188 | BO2 | Bortezomib | 22 |
| DB02930 | AGS | Adenosine 5'-[gamma-thio]triphosphate | 18 |
| DB03685 | U5P | Uridine monophosphate | 15 |
| DB03796 | PLM | Palmitic Acid | 11 |
| DB08231 | MYR | Myristic acid | 11 |
| DB00131 | AMP | Adenosine phosphate | 9 |
| DB00536 | GAI | Guanidine | 9 |
| DB04160 | PPV | Pyrophosphoric acid | 8 |
| DB04257 | PAM | Palmitoleic Acid | 8 |
| DB01972 | 5GP | Guanosine-5'-Monophosphate | 7 |
| DB03435 | UDP | Uridine-5'-Diphosphate | 7 |
| DB03566 | SPD | Spermidine | 7 |
| DB01991 | TUX | TU-514 | 6 |
| DB04237 | TAM | Tris(Hydroxyethyl)Aminomethane | 6 |
| DB07536 | C90 | N-{(1S,2R)-2-hydroxy-1-[(hydroxyamino)carbonyl]propyl}-4-{[4-(morpholin-4-ylmethyl)phenyl]ethynyl}benzamide | 6 |
| DB00161 | VAL | Valine | 5 |
| DB00173 | ADE | Adenine | 5 |
| DB03345 | BME | Mercaptoethanol | 5 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 1,139 |
| MNmetal | MANGANESE (II) ION | 500 |
| ZNmetal | ZINC ION | 195 |
| ANP | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | 168 |
| 5LD | [(2R)-2-hydroxy-3-(1H-1,2,4-triazol-1-yl)propyl]phosphonic acid | 128 |
| CL | CHLORIDE ION | 122 |
| ADP | ADENOSINE-5'-DIPHOSPHATE | 72 |
| OHX | osmium (III) hexammine | 62 |
| GAL | beta-D-galactopyranose | 56 |
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 50 |
| 3TR | 3-AMINO-1,2,4-TRIAZOLE | 49 |
| IG2 | (2S,3S)-2,3-dihydroxy-3-(1H-imidazol-5-yl)propyl dihydrogen phosphate | 49 |
| Kmetal | POTASSIUM ION | 44 |
| HFK | 2-(1,3-benzoxazol-2-ylamino)spiro[1,6,7,8-tetrahydroquinazoline-4,1'-cyclohexane]-5-one | 38 |
| 4KZ | N-[(1R)-1-(dihydroxyboranyl)-2-phenylethyl]-Nalpha-(pyrazin-2-ylcarbonyl)-L-phenylalaninamide | 36 |
| BO2 | N-[(1R)-1-(DIHYDROXYBORYL)-3-METHYLBUTYL]-N-(PYRAZIN-2-YLCARBONYL)-L-PHENYLALANINAMIDE | 35 |
| GLA | alpha-D-galactopyranose | 34 |
| NAmetal | SODIUM ION | 32 |
| DP6 | (3R)-3-HYDROXY-5-{[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]OXY}-3-METHYLPENTANOIC ACID | 31 |
| SPD | SPERMIDINE | 29 |