ECOD
F-group (family)

212.1.1.15 LpxC

Open in classification tree →Pfam PF03331 →

Ligands and drugs

477
Member domains
178
with ligand contacts (≤ 4 Å)
37.3% of members
176
with DrugDomain annotations
36.9% of members
112
with a DrugBank compound
23.5% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 212.1.1.15 belongs to X-group 212 Ribosomal protein S5 domain 2-like, which binds 9.4 ligand superclasses per 20 proteins, broader than 86% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB03796PLMPalmitic Acid11
DB08231MYRMyristic acid11
DB04257PAMPalmitoleic Acid8
DB01991TUXTU-5146
DB03435UDPUridine-5'-Diphosphate6
DB07536C90N-{(1S,2R)-2-hydroxy-1-[(hydroxyamino)carbonyl]propyl}-4-{[4-(morpholin-4-ylmethyl)phenyl]ethynyl}benzamide6
DB03434MPO3-(N-morpholino)propanesulfonic acid4
DB07355AI73-(heptyloxy)benzoic acid4
DB07861GVR(2R)-N-hydroxy-3-naphthalen-2-yl-2-[(naphthalen-2-ylsulfonyl)amino]propanamide4
DB00536GAIGuanidine1
DB02693D1D(4S,5S)-1,2-dithiane-4,5-diol1
DB14212MPBMethylparaben1

Most frequently bound compounds

PDB ligandNameDomains in contact
ZNmetalZINC ION171
CLCHLORIDE ION40
MYRMYRISTIC ACID11
PLMPALMITIC ACID11
24Guridine-5'-diphosphate-3-O-(R-3-hydroxymyristoyl)-glucosamine10
3P3N-[(1S,2R)-2-hydroxy-1-(hydroxycarbamoyl)propyl]-4-(4-phenylbuta-1,3-diyn-1-yl)benzamide8
PAMPALMITOLEIC ACID8
C90N-{(1S,2R)-2-hydroxy-1-[(hydroxyamino)carbonyl]propyl}-4-{[4-(morpholin-4-ylmethyl)phenyl]ethynyl}benzamide6
TUX1,5-ANHYDRO-2-C-(CARBOXYMETHYL-N-HYDROXYAMIDE)-2-DEOXY-3-O-MYRISTOYL-D-GLUCITOL6
UDPURIDINE-5'-DIPHOSPHATE6
MGmetalMAGNESIUM ION5
UKW4-ethynyl-N-[(1S,2R)-2-hydroxy-1-(oxocarbamoyl)propyl]benzamide5
ZH24-[4-(4-aminophenyl)buta-1,3-diyn-1-yl]-N-[(2S,3R)-3-hydroxy-1-(hydroxyamino)-1-oxobutan-2-yl]benzamide5
5EPN~2~-{4-[4-(4-aminophenyl)buta-1,3-diyn-1-yl]benzoyl}-N-hydroxy-L-isoleucinamide4
AI73-(heptyloxy)benzoic acid4
FXX(3R)-3-azanyl-4-oxidanylidene-4-[[3-(trifluoromethyloxy)phenyl]amino]butanoic acid4
GVR(2R)-N-hydroxy-3-naphthalen-2-yl-2-[(naphthalen-2-ylsulfonyl)amino]propanamide4
L52N-[(2S)-3-amino-1-(hydroxyamino)-1-oxopropan-2-yl]-4-(4-phenylbuta-1,3-diyn-1-yl)benzamide4
L584'-bromo-N-[(2S,3R)-3-hydroxy-1-(hydroxyamino)-1-oxobutan-2-yl]biphenyl-4-carboxamide4
L59N-[(2S,3R)-3-hydroxy-1-(hydroxyamino)-1-oxobutan-2-yl]-4-(phenylethynyl)benzamide4