T-group (topology)

230.2.1 Ribosomal protein S3-C

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Ligands and drugs

3,226

Member domains

287

with ligand contacts (≤ 4 Å)

8.9% of members

with DrugDomain annotations

2.3% of members

with a DrugBank compound

<0.1% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 230.2.1 belongs to X-group 230 T-fold, which binds 7.3 ligand superclasses per 20 proteins, narrower than 57% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBank	PDB ligand	Name	Domains
DB02379	BGC	Beta-D-Glucose	2
DB03725	GCP	5'-Guanylylmethylenebisphosphonate	1

Most frequently bound compounds

PDB ligand	Name	Domains in contact
MGmetal	MAGNESIUM ION	263
SPM	SPERMINE	8
Kmetal	POTASSIUM ION	4
WO2	OCTADECATUNGSTENYL DIPHOSPHATE	4
OIY	Streptothricin D	3
A1JAI	[(2~{S},3~{S},4~{R},5~{R},6~{S})-4-[(2~{S},3~{R},4~{S},5~{R},6~{S})-5-acetamido-6-(hydroxymethyl)-4-[(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-4-[(2~{S},3~{R},4~{R},5~{R},6~{R})-6-(hydroxymethyl)-5-methoxy-3,4-bis(oxidanyl)oxan-2-yl]oxy-3,5-bis(oxidanyl)oxan-2-yl]oxy-3-oxidanyl-oxan-2-yl]oxy-2-(hydroxymethyl)-6-[[~{N}-[4-[(~{N}-methylcarbamimidoyl)amino]butyl]carbamimidoyl]amino]-5-oxidanyl-oxan-3-yl] carbamate	2
BGC	beta-D-glucopyranose	2
UNX	UNKNOWN ATOM OR ION	2
A1JA7	[(2~{S},3~{S},4~{R},5~{R},6~{S})-4-[(2~{S},3~{R},4~{S},5~{R},6~{S})-5-acetamido-6-(hydroxymethyl)-4-[(2~{R},3~{R},4~{S},5~{S},6~{R})-6-(hydroxymethyl)-4-[(2~{S},3~{R},4~{R},5~{R},6~{R})-6-(hydroxymethyl)-5-methoxy-3,4-bis(oxidanyl)oxan-2-yl]oxy-3,5-bis(oxidanyl)oxan-2-yl]oxy-3-oxidanyl-oxan-2-yl]oxy-6-carbamimidamido-2-(hydroxymethyl)-5-oxidanyl-oxan-3-yl] carbamate	1
GCP	PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER	1
OI9	Streptothricin F	1