F-group (family)
2484.1.1.13 RNase_T
Ligands and drugs
874
Member domains
165
with ligand contacts (≤ 4 Å)
18.9% of members
149
with DrugDomain annotations
17.0% of members
71
with a DrugBank compound
8.1% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2484.1.1.13 belongs to X-group 2484 Ribonuclease H-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 77% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00131 | AMP | Adenosine phosphate | 21 |
| DB03685 | U5P | Uridine monophosphate | 5 |
| DB01643 | TMP | Thymidine monophosphate | 4 |
| DB03403 | C5P | Cytidine-5'-Monophosphate | 2 |
| DB01972 | 5GP | Guanosine-5'-Monophosphate | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 68 |
| NAmetal | SODIUM ION | 29 |
| MNmetal | MANGANESE (II) ION | 22 |
| AMP | ADENOSINE MONOPHOSPHATE | 21 |
| COmetal | COBALT (II) ION | 18 |
| ZNmetal | ZINC ION | 12 |
| CAmetal | CALCIUM ION | 10 |
| TMP | THYMIDINE-5'-PHOSPHATE | 5 |
| Kmetal | POTASSIUM ION | 4 |
| U5P | URIDINE-5'-MONOPHOSPHATE | 4 |
| 9RC | 5'-O-[(S)-hydroxy(4-nitrophenoxy)phosphoryl]thymidine | 2 |
| C5P | CYTIDINE-5'-MONOPHOSPHATE | 2 |
| CDmetal | CADMIUM ION | 2 |
| ER3metal | ERBIUM (III) ION | 2 |
| SMmetal | SAMARIUM (III) ION | 2 |
| 5GP | GUANOSINE-5'-MONOPHOSPHATE | 1 |