H-group (homology)
2484.1 Ribonuclease H-like
Ligands and drugs
43,402
Member domains
11,714
with ligand contacts (≤ 4 Å)
27.0% of members
8,325
with DrugDomain annotations
19.2% of members
5,922
with a DrugBank compound
13.6% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2484.1 belongs to X-group 2484 Ribonuclease H-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 77% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB16833 | ADP | Adenosine disphosphate | 2,577 |
| DB00171 | ATP | ATP | 896 |
| DB00131 | AMP | Adenosine phosphate | 107 |
| DB02379 | BGC | Beta-D-Glucose | 88 |
| DB08080 | LAB | Latrunculin B | 87 |
| DB02621 | LAR | Latrunculin A | 50 |
| DB01783 | PAU | Pantothenic acid | 45 |
| DB02210 | HEZ | Hexane-1,6-Diol | 29 |
| DB08930 | DLU | Dolutegravir | 29 |
| DB04137 | GTP | Guanosine-5'-Triphosphate | 28 |
| DB03222 | DTP | dATP | 24 |
| DB03909 | ACP | Adenosine-5'-[Beta, Gamma-Methylene]Triphosphate | 24 |
| DB01972 | 5GP | Guanosine-5'-Monophosphate | 22 |
| DB04315 | GDP | Guanosine-5'-Diphosphate | 20 |
| DB02159 | PGR | (R)-Propylene glycol | 19 |
| DB02930 | AGS | Adenosine 5'-[gamma-thio]triphosphate | 18 |
| DB04122 | BG6 | beta-D-glucose 6-phosphate | 18 |
| DB00141 | NAG | N-Acetylglucosamine | 17 |
| DB01643 | TMP | Thymidine monophosphate | 17 |
| DB03740 | NDG | N-acetyl-alpha-D-glucosamine | 15 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 4,580 |
| ADP | ADENOSINE-5'-DIPHOSPHATE | 4,168 |
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 1,071 |
| CAmetal | CALCIUM ION | 610 |
| CL | CHLORIDE ION | 509 |
| ZNmetal | ZINC ION | 476 |
| ANP | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER | 401 |
| Kmetal | POTASSIUM ION | 311 |
| MNmetal | MANGANESE (II) ION | 267 |
| NAmetal | SODIUM ION | 252 |
| OHX | osmium (III) hexammine | 125 |
| BGC | beta-D-glucopyranose | 124 |
| GLC | alpha-D-glucopyranose | 123 |
| AMP | ADENOSINE MONOPHOSPHATE | 104 |
| LAB | LATRUNCULIN B | 88 |
| IOD | IODIDE ION | 86 |
| CDmetal | CADMIUM ION | 71 |
| BEF | BERYLLIUM TRIFLUORIDE ION | 70 |
| 9UE | Jasplakinolide | 67 |
| UNX | UNKNOWN ATOM OR ION | 67 |