F-group (family)
2484.1.1.20 DNA_pol_A_exo1
Ligands and drugs
468
Member domains
119
with ligand contacts (≤ 4 Å)
25.4% of members
104
with DrugDomain annotations
22.2% of members
55
with a DrugBank compound
11.8% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2484.1.1.20 belongs to X-group 2484 Ribonuclease H-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 77% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB01972 | 5GP | Guanosine-5'-Monophosphate | 16 |
| DB01812 | A3P | Adenosine 3',5'-diphosphate | 8 |
| DB00131 | AMP | Adenosine phosphate | 2 |
| DB03685 | U5P | Uridine monophosphate | 1 |
| DB04457 | DGP | 2'-Deoxyguanosine-5'-Monophosphate | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 32 |
| MNmetal | MANGANESE (II) ION | 31 |
| 5GP | GUANOSINE-5'-MONOPHOSPHATE | 17 |
| NAmetal | SODIUM ION | 17 |
| ZNmetal | ZINC ION | 14 |
| CL | CHLORIDE ION | 10 |
| A3P | ADENOSINE-3'-5'-DIPHOSPHATE | 8 |
| YT3metal | YTTRIUM (III) ION | 6 |
| CAmetal | CALCIUM ION | 3 |
| AMP | ADENOSINE MONOPHOSPHATE | 2 |
| GDmetal | GADOLINIUM ATOM | 2 |
| DGP | 2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE | 1 |
| EUmetal | EUROPIUM ION | 1 |
| EU3metal | EUROPIUM (III) ION | 1 |
| TBmetal | TERBIUM(III) ION | 1 |
| TMP | THYMIDINE-5'-PHOSPHATE | 1 |