F-group (family)
2484.1.1.4 RNase_H
Ligands and drugs
1,058
Member domains
339
with ligand contacts (≤ 4 Å)
32.0% of members
301
with DrugDomain annotations
28.4% of members
139
with a DrugBank compound
13.1% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2484.1.1.4 belongs to X-group 2484 Ribonuclease H-like, which binds 8.9 ligand superclasses per 20 proteins, broader than 77% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB01694 | TAR | D-tartaric acid | 3 |
| DB09459 | TLA | L-tartaric acid | 3 |
| DB02175 | MLA | Malonic acid | 1 |
| DB14756 | SRT | meso-Tartaric acid | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 167 |
| MNmetal | MANGANESE (II) ION | 54 |
| CAmetal | CALCIUM ION | 22 |
| ZNmetal | ZINC ION | 14 |
| CDmetal | CADMIUM ION | 7 |
| JTH | 2,7-dihydroxy-4-(propan-2-yl)cyclohepta-2,4,6-trien-1-one | 4 |
| CL | CHLORIDE ION | 3 |
| F95 | (7,8-dihydroxy-2-oxo-2H-chromen-4-yl)acetic acid | 3 |
| TAR | D(-)-TARTARIC ACID | 3 |
| TLA | L(+)-TARTARIC ACID | 3 |
| BYZ | 4-bromo-1H-pyrazole | 2 |
| LP9 | 3-[4-(diethylamino)phenoxy]-6-(ethoxycarbonyl)-5,8-dihydroxy-7-oxo-7,8-dihydro-1,8-naphthyridin-1-ium | 2 |
| MRD | (4R)-2-METHYLPENTANE-2,4-DIOL | 2 |
| NAmetal | SODIUM ION | 2 |
| Y55 | 7-(furan-2-yl)-2-hydroxyisoquinoline-1,3(2H,4H)-dione | 2 |
| ZW2 | 6-benzyl-3-hydroxythieno[2,3-d]pyrimidine-2,4(1H,3H)-dione | 2 |
| 1FE | N-(2-oxo-2,3-dihydro-1H-benzimidazol-5-yl)glycinamide | 1 |
| 1FF | 1-methyl-5-phenyl-1H-pyrazole-4-carboxylic acid | 1 |
| 1FG | 2-({[2-(3,4-dihydroquinolin-1(2H)-yl)-2-oxoethyl](methyl)amino}methyl)quinazolin-4(1H)-one | 1 |
| 6FT | 5-hydroxy-4-oxo-1-[(4'-sulfamoyl[1,1'-biphenyl]-4-yl)methyl]-1,4-dihydropyridine-3-carboxylic acid | 1 |