F-group (family)
2487.1.1.9 Cyclase
Ligands and drugs
226
Member domains
70
with ligand contacts (≤ 4 Å)
31.0% of members
54
with DrugDomain annotations
23.9% of members
30
with a DrugBank compound
13.3% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2487.1.1.9 belongs to X-group 2487 The "swivelling" beta/beta/alpha domains, which binds 8.6 ligand superclasses per 20 proteins, broader than 71% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00139 | SIN | Succinic acid | 10 |
| DB00676 | BZM | Benzyl benzoate | 4 |
| DB02897 | UVW | Acetylphosphate | 4 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MNmetal | MANGANESE (II) ION | 38 |
| ZNmetal | ZINC ION | 27 |
| 23J | oxo(2-sulfanylphenyl)acetic acid | 12 |
| CAmetal | CALCIUM ION | 10 |
| SIN | SUCCINIC ACID | 10 |
| MGmetal | MAGNESIUM ION | 9 |
| 92K | Isatinic acid | 4 |
| BZM | BENZOIC ACID PHENYLMETHYLESTER | 4 |
| CDmetal | CADMIUM ION | 4 |
| UVW | ACETYLPHOSPHATE | 4 |
| CL | CHLORIDE ION | 2 |
| GXT | ethanedial | 2 |
| NAmetal | SODIUM ION | 2 |
| VNJ | 2-aminoacetophenone | 2 |