F-group (family)
2488.1.1.1 SpoU_methylase
Ligands and drugs
409
Member domains
60
with ligand contacts (≤ 4 Å)
14.7% of members
55
with DrugDomain annotations
13.4% of members
51
with a DrugBank compound
12.5% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2488.1.1.1 belongs to X-group 2488 alpha/beta knot, which binds 6.6 ligand superclasses per 20 proteins, narrower than 66% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB01752 | SAH | S-adenosyl-L-homocysteine | 18 |
| DB00118 | SAM | Ademetionine | 8 |
| DB02282 | MTA | 5'-S-methyl-5'-thioadenosine | 6 |
| DB01910 | SFG | Sinefungin | 4 |
| DB00640 | ADN | Adenosine | 2 |
| DB03345 | BME | Mercaptoethanol | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| SAH | S-ADENOSYL-L-HOMOCYSTEINE | 19 |
| CL | CHLORIDE ION | 11 |
| SAM | S-ADENOSYLMETHIONINE | 9 |
| MTA | 5'-DEOXY-5'-METHYLTHIOADENOSINE | 5 |
| SFG | SINEFUNGIN | 5 |
| ADN | ADENOSINE | 2 |
| BME | BETA-MERCAPTOETHANOL | 1 |
| IOD | IODIDE ION | 1 |