F-group (family)
2498.1.1.12 Peptidase_M4,Peptidase_M4_C
Ligands and drugs
304
Member domains
268
with ligand contacts (≤ 4 Å)
88.2% of members
254
with DrugDomain annotations
83.6% of members
193
with a DrugBank compound
63.5% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 2498.1.1.12 belongs to X-group 2498 Zincin-like, which binds 9.5 ligand superclasses per 20 proteins, broader than 89% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00123 | LYS | Lysine | 48 |
| DB00161 | VAL | Valine | 42 |
| DB04569 | PHQ | Benzyl formate | 8 |
| DB00149 | LEU | Leucine | 7 |
| DB00167 | ILE | Isoleucine | 4 |
| DB02557 | RDF | Phosphoramidon | 4 |
| DB00156 | THR | Threonine | 3 |
| DB06838 | 0A9 | methyl L-phenylalaninate | 3 |
| DB00128 | ASP | Aspartic acid | 2 |
| DB00135 | TYR | Tyrosine | 1 |
| DB00142 | GLU | Glutamic acid | 1 |
| DB00150 | TRP | Tryptophan | 1 |
| DB00160 | ALA | Alanine | 1 |
| DB00174 | ASN | Asparagine | 1 |
| DB01786 | DAL | D-Alanine | 1 |
| DB01914 | GLO | D-glucose | 1 |
| DB01935 | RRT | 3-{[(1r)-1-Benzyl-2-Sulfanylethyl]Amino}-3-Oxopropanoic Acid | 1 |
| DB02198 | BXA | 2-Bromoacetyl Group | 1 |
| DB02307 | HPI | N-(1-carboxy-3-phenylpropyl)phenylalanyl-alpha-asparagine | 1 |
| DB02365 | PHN | 1,10-Phenanthroline | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CAmetal | CALCIUM ION | 264 |
| ZNmetal | ZINC ION | 256 |
| LYS | LYSINE | 52 |
| VAL | VALINE | 46 |
| CL | CHLORIDE ION | 13 |
| XYP | beta-D-xylopyranose | 11 |
| NAmetal | SODIUM ION | 10 |
| PHQ | benzyl chlorocarbonate | 8 |
| ILE | ISOLEUCINE | 7 |
| NX6 | N-[(benzyloxy)carbonyl]-L-aspartic acid | 6 |
| LEU | LEUCINE | 5 |
| MRD | (4R)-2-METHYLPENTANE-2,4-DIOL | 5 |
| CDmetal | CADMIUM ION | 4 |
| CI8 | 2-[2-[[5-[3-[bis(2-hydroxyethyl)-methyl-$l^{4}-azanyl]propoxy]-6-methoxy-1,3-benzothiazol-2-yl]methylcarbamoyl]-5,6-bis(fluoranyl)-1,3-dihydroinden-2-yl]ethanoic acid | 4 |
| RDF | N-ALPHA-L-RHAMNOPYRANOSYLOXY(HYDROXYPHOSPHINYL)-L-LEUCYL-L-TRYPTOPHAN | 4 |
| 0A9 | methyl L-phenylalaninate | 3 |
| 7GR | (2~{S})-4-methyl-2-[2-[[oxidanyl(phenylmethoxycarbonylaminomethyl)phosphoryl]amino]ethanoylamino]pentanoic acid | 3 |
| KR | KRYPTON | 3 |
| THR | THREONINE | 3 |
| TMO | trimethylamine oxide | 3 |