ECOD
T-group (topology)

2500.1.1 Ten stranded beta/alpha barrel

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Ligands and drugs

896
Member domains
429
with ligand contacts (≤ 4 Å)
47.9% of members
248
with DrugDomain annotations
27.7% of members
220
with a DrugBank compound
24.6% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 2500.1.1 belongs to X-group 2500 Ten stranded beta/alpha barrel, which binds 8.0 ligand superclasses per 20 proteins, broader than 55% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB02452TTPThymidine 5'-triphosphate49
DB03222DTPdATP48
DB04555CDPCytidine-5'-Diphosphate22
DB02181DGT2'-Deoxyguanosine-5'-Triphosphate17
DB04315GDPGuanosine-5'-Diphosphate17
DB00122CHTCholine16
DB16833ADPAdenosine disphosphate9
DB04401BTLBetaine aldehyde8
DB08847HYPHydroxyproline8
DB03435UDPUridine-5'-Diphosphate7
DB00119PYRPyruvic acid5
DB03278DTLD-Treitol4
DB04349PGO(S)-propane-1,2-diol4
DB01677FUMFumaric acid3
DB02431CTPCytidine-5'-Triphosphate3
DB03940OXMOxamic Acid3
DB00171ATPATP2
DB00640ADNAdenosine2
DB01992COACoenzyme A2
DB03258DCP2'-Deoxycytidine 5'-triphosphate2

Most frequently bound compounds

PDB ligandNameDomains in contact
TTPTHYMIDINE-5'-TRIPHOSPHATE148
MGmetalMAGNESIUM ION139
DTP2'-DEOXYADENOSINE 5'-TRIPHOSPHATE81
CDPCYTIDINE-5'-DIPHOSPHATE30
DGT2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE18
ZNmetalZINC ION18
GDPGUANOSINE-5'-DIPHOSPHATE17
CHTCHOLINE ION16
NAmetalSODIUM ION12
ATPADENOSINE-5'-TRIPHOSPHATE11
ADPADENOSINE-5'-DIPHOSPHATE9
CLCHLORIDE ION9
8X32-hydroxyethylsulfonic acid8
A1H9Ifluoromethylcholine8
A1H9Kcyclopropylcholine8
A1H9Ldifluorocholine8
BTLBETAINE ALDEHYDE8
FUMFUMARIC ACID8
HYP4-HYDROXYPROLINE8
ANPPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER7