ECOD
F-group (family)

301.7.1.1 Ribonuc_L-PSP

Open in classification tree →Pfam PF01042 →

Ligands and drugs

549
Member domains
128
with ligand contacts (≤ 4 Å)
23.3% of members
111
with DrugDomain annotations
20.2% of members
89
with a DrugBank compound
16.2% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 301.7.1.1 belongs to X-group 301 Bacillus chorismate mutase-like, which binds 10.5 ligand superclasses per 20 proteins, broader than 97% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB03793BEZBenzoic acid9
DB00119PYRPyruvic acid3
DB02379BGCBeta-D-Glucose3
DB02406LEAN-Valeric Acid3
DB03766PPIPropanoic acid3
DB045532KT2-Oxobutanoic Acid3
DB00133SERSerine2
DB03568BUAButyric Acid2

Most frequently bound compounds

PDB ligandNameDomains in contact
BEZBENZOIC ACID9
CAmetalCALCIUM ION9
CLCHLORIDE ION7
MGmetalMAGNESIUM ION6
PYRPYRUVIC ACID5
2KT2-KETOBUTYRIC ACID4
BGCbeta-D-glucopyranose3
KmetalPOTASSIUM ION3
LEAPENTANOIC ACID3
NImetalNICKEL (II) ION3
PPIPROPANOIC ACID3
UNXUNKNOWN ATOM OR ION3
ZNmetalZINC ION3
BUAbutanoic acid2
EMCETHYL MERCURY ION2
HGmetalMERCURY (II) ION2
NAmetalSODIUM ION2
SERSERINE2
TMOtrimethylamine oxide2
ACEACETYL GROUP1