F-group (family)
316.1.1.21 Aminoglyc_resit
Ligands and drugs
25
Member domains
13
with ligand contacts (≤ 4 Å)
52.0% of members
13
with DrugDomain annotations
52.0% of members
11
with a DrugBank compound
44.0% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 316.1.1.21 belongs to X-group 316 Nucleotidyltransferase-like, which binds 7.3 ligand superclasses per 20 proteins, narrower than 56% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00684 | TOY | Tobramycin | 2 |
| DB01627 | 3QB | Lincomycin | 2 |
| DB02596 | APC | alpha,beta-Methyleneadenosine 5'-triphosphate | 2 |
| DB00131 | AMP | Adenosine phosphate | 1 |
| DB01172 | KAN | Kanamycin | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 4 |
| CL | CHLORIDE ION | 3 |
| MNmetal | MANGANESE (II) ION | 3 |
| 3QB | LINCOMYCIN | 2 |
| APC | DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER | 2 |
| P6G | HEXAETHYLENE GLYCOL | 2 |
| TOY | TOBRAMYCIN | 2 |
| 51G | gentamicin C1 | 1 |
| 51H | adenylyl-2"-tobramycin | 1 |
| AMP | ADENOSINE MONOPHOSPHATE | 1 |
| KAN | KANAMYCIN A | 1 |
| NAmetal | SODIUM ION | 1 |
| PG0 | 2-(2-METHOXYETHOXY)ETHANOL | 1 |
| POP | PYROPHOSPHATE 2- | 1 |
| UNL | Unknown ligand | 1 |