F-group (family)
316.1.1.23 DNA_pol_B_thumb
Ligands and drugs
45
Member domains
16
with ligand contacts (≤ 4 Å)
35.6% of members
10
with DrugDomain annotations
22.2% of members
5
with a DrugBank compound
11.1% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 316.1.1.23 belongs to X-group 316 Nucleotidyltransferase-like, which binds 7.3 ligand superclasses per 20 proteins, narrower than 56% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02181 | DGT | 2'-Deoxyguanosine-5'-Triphosphate | 3 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CL | CHLORIDE ION | 5 |
| MGmetal | MAGNESIUM ION | 5 |
| MNmetal | MANGANESE (II) ION | 5 |
| CAmetal | CALCIUM ION | 3 |
| DG3 | 2'-3'-DIDEOXYGUANOSINE-5'-TRIPHOSPHATE | 3 |
| DGT | 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | 3 |
| 7Q6 | [[(2R,3S,5R)-5-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-3-oxidanyl-oxolan-2-yl]methoxy-selanyl-phosphoryl] phosphono hydrogen phosphate | 2 |
| HGmetal | MERCURY (II) ION | 2 |
| DUP | 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE | 1 |
| GMS | 2'-DEOXYGUANOSINE-5'-MONOSELENOPHOSPHATE | 1 |