F-group (family)
316.1.1.4 NTP_transf_2,DNA_pol_B_thumb
Ligands and drugs
73
Member domains
57
with ligand contacts (≤ 4 Å)
78.1% of members
55
with DrugDomain annotations
75.3% of members
31
with a DrugBank compound
42.5% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 316.1.1.4 belongs to X-group 316 Nucleotidyltransferase-like, which binds 7.3 ligand superclasses per 20 proteins, narrower than 56% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02181 | DGT | 2'-Deoxyguanosine-5'-Triphosphate | 12 |
| DB02596 | APC | alpha,beta-Methyleneadenosine 5'-triphosphate | 5 |
| DB02189 | — | 2',3'-Dideoxyadenosine triphosphate | 1 |
| DB03258 | DCP | 2'-Deoxycytidine 5'-triphosphate | 1 |
| DB03345 | BME | Mercaptoethanol | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| MGmetal | MAGNESIUM ION | 28 |
| MNmetal | MANGANESE (II) ION | 16 |
| DGT | 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE | 14 |
| DCT | 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE | 9 |
| ZNmetal | ZINC ION | 6 |
| APC | DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER | 5 |
| COmetal | COBALT (II) ION | 3 |
| 1FO | 6-[4-(3-fluorobenzoyl)-1H-pyrrol-2-yl]-2-hydroxy-4-oxohexa-2,5-dienoic acid | 2 |
| 1FQ | (2Z,5E)-6-[4-(4-fluorobenzoyl)-1H-pyrrol-2-yl]-2-hydroxy-4-oxohexa-2,5-dienoic acid | 2 |
| NAmetal | SODIUM ION | 2 |
| BME | BETA-MERCAPTOETHANOL | 1 |
| D3T | 2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE | 1 |
| DAD | 2',3'-DIDEOXYADENOSINE-5'-TRIPHOSPHATE | 1 |
| DCP | 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE | 1 |
| DZ4 | 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine | 1 |
| POP | PYROPHOSPHATE 2- | 1 |