T-group (topology)
325.1.7 Single hybrid motif
Ligands and drugs
11,394
Member domains
472
with ligand contacts (≤ 4 Å)
4.1% of members
280
with DrugDomain annotations
2.5% of members
182
with a DrugBank compound
1.6% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 325.1.7 belongs to X-group 325 alpha/beta-Hammerhead/Barrel-sandwich hybrid, which binds 8.9 ligand superclasses per 20 proteins, broader than 75% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB07497 | BTI | 5-(hexahydro-2-oxo-1H-thieno[3,4-D]imidazol-6-yl)pentanal | 91 |
| DB01045 | RFP | Rifampin | 13 |
| DB02536 | 3GR | D-glyceraldehyde | 9 |
| DB03760 | RED | Dihydrolipoic Acid | 9 |
| DB00121 | BTN | Biotin | 8 |
| DB02431 | CTP | Cytidine-5'-Triphosphate | 5 |
| DB00157 | — | NADH | 2 |
| DB00166 | LPA | Lipoic acid | 2 |
| DB00615 | RBT | Rifabutin | 2 |
| DB01201 | RPT | Rifapentine | 2 |
| DB03187 | OSS | 6-(Hydroxyethyldithio)-8-(Aminomethylthio)Octanoic Acid | 2 |
| DB03758 | — | Radicicol | 2 |
| DB04457 | DGP | 2'-Deoxyguanosine-5'-Monophosphate | 2 |
| DB00630 | — | Alendronic acid | 1 |
| DB01077 | — | Etidronic acid | 1 |
| DB03781 | — | 2-[4-(2,4-Dichlorophenoxy)Phenoxy]Propanoic Acid | 1 |
| DB04005 | UTP | Uridine 5'-triphosphate | 1 |
| DB06733 | — | — | 1 |
| DB06734 | — | — | 1 |
| DB07870 | — | Haloxyfop-P | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| BTI | 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL | 157 |
| BTN | BIOTIN | 96 |
| MGmetal | MAGNESIUM ION | 36 |
| 1N7 | CHAPSO | 35 |
| NAmetal | SODIUM ION | 12 |
| IOD | IODIDE ION | 10 |
| 3GR | D-Glyceraldehyde | 9 |
| MNmetal | MANGANESE (II) ION | 8 |
| RED | DIHYDROLIPOIC ACID | 8 |
| RFP | RIFAMPICIN | 8 |
| DPO | DIPHOSPHATE | 6 |
| CTP | CYTIDINE-5'-TRIPHOSPHATE | 5 |
| 7ID | (2~{S})-4-[[(2~{S})-5-[[azanyl($l^{4}-azanylidene)methyl]amino]-1-$l^{1}-oxidanyl-1-oxidanylidene-pentan-2-yl]amino]-2-$l^{2}-azanyl-4-oxidanylidene-butanoic acid | 4 |
| SRN | SORANGICIN A | 4 |
| ZNmetal | ZINC ION | 4 |
| 3PE | 1,2-Distearoyl-sn-glycerophosphoethanolamine | 2 |
| 4QM | (3R,5S,7R,8R,9S,10S,12S,13R,14S,17R)-10,13-dimethyl-17-[(2R)-pentan-2-yl]-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthrene-3,7,12-triol | 2 |
| B4P | BIS(ADENOSINE)-5'-TETRAPHOSPHATE | 2 |
| KNG | Kanglemycin A | 2 |
| LPA | LIPOIC ACID | 2 |