T-group (topology)
376.1.1 RING/U-box
Ligands and drugs
10,083
Member domains
1,623
with ligand contacts (≤ 4 Å)
16.1% of members
986
with DrugDomain annotations
9.8% of members
112
with a DrugBank compound
1.1% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 376.1.1 belongs to X-group 376 RING/U-box-like, which binds 3.8 ligand superclasses per 20 proteins, narrower than 92% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02210 | HEZ | Hexane-1,6-Diol | 6 |
| DB02676 | B3P | 2-[3-(2-Hydroxy-1,1-Dihydroxymethyl-Ethylamino)-Propylamino]-2-Hydroxymethyl-Propane-1,3-Diol | 3 |
| DB02587 | — | Colforsin | 2 |
| DB00125 | ARG | Arginine | 1 |
| DB00145 | GLY | Glycine | 1 |
| DB01169 | — | — | 1 |
| DB01497 | — | — | 1 |
| DB01548 | — | — | 1 |
| DB01565 | — | — | 1 |
| DB01890 | CPQ | N,N-Bis(3-(D-gluconamido)propyl)deoxycholamide | 1 |
| DB04209 | — | Dequalinium | 1 |
| DB05223 | — | — | 1 |
| DB06176 | — | — | 1 |
| DB12816 | — | — | 1 |
| DB13346 | — | Bufexamac | 1 |
| DB16833 | ADP | Adenosine disphosphate | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ZNmetal | ZINC ION | 1,602 |
| CL | CHLORIDE ION | 50 |
| UNX | UNKNOWN ATOM OR ION | 24 |
| 1N7 | CHAPSO | 15 |
| NAmetal | SODIUM ION | 10 |
| CAmetal | CALCIUM ION | 7 |
| HEZ | HEXANE-1,6-DIOL | 6 |
| A1BNE | 1-[(2R)-2,3-dihydro-1,4-benzodioxin-2-yl]-N-methylmethanamine | 4 |
| A1CYD | 4-methyl-N-{[(2S)-oxolan-2-yl]methyl}-1,3-thiazol-2-amine | 4 |
| A1CYF | 3-(5-methyl-1,2,4-oxadiazol-3-yl)aniline | 4 |
| A1H6Y | 1-bromanyl-4-methylsulfonyl-benzene | 4 |
| IOD | IODIDE ION | 4 |
| JHP | 4-chloro-N-cyclopentyl-1-methyl-1H-pyrazole-3-carboxamide | 4 |
| KB3 | (5M)-5-(2-methoxyphenyl)-1,3,4-oxadiazol-2-amine | 4 |
| KF8 | N-[(3S)-piperidin-3-yl]benzamide | 4 |
| NImetal | NICKEL (II) ION | 4 |
| Q7L | (3P)-3-(2H-1,3-benzodioxol-5-yl)-1H-pyrazole | 4 |
| U0P | N'-cyclopropyl-N-methyl-N-[(5-methyl-1,2-oxazol-3-yl)methyl]urea | 4 |
| W1Y | N-methyl-1-(1-phenyl-1H-pyrazol-4-yl)methanamine | 4 |
| W2J | [(3R,5R)-5-methylpiperidin-3-yl]methanol | 4 |