F-group (family)
4020.1.1.1 Aminotran_4
Ligands and drugs
464
Member domains
285
with ligand contacts (≤ 4 Å)
61.4% of members
247
with DrugDomain annotations
53.2% of members
206
with a DrugBank compound
44.4% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 4020.1.1.1 belongs to X-group 4020 a+b domain in D-aminoacid aminotransferase-like PLP-dependent enzymes, which binds 7.0 ligand superclasses per 20 proteins, narrower than 58% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00114 | PLP | Pyridoxal phosphate | 142 |
| DB02142 | PMP | Pyridoxamine-5'-Phosphate | 17 |
| DB00160 | ALA | Alanine | 6 |
| DB01813 | PPE | Pyridoxyl-Glutamic Acid-5'-Monophosphate | 6 |
| DB03993 | 4MV | Isocaproic acid | 6 |
| DB08845 | AKG | Oxogluric acid | 6 |
| DB00996 | GBN | Gabapentin | 3 |
| DB02038 | DCS | D-[3-hydroxy-2-methyl-5-phosphonooxymethyl-pyridin-4-ylmethyl]-N,O-cycloserylamide | 3 |
| DB03553 | GUA | Glutaric Acid | 3 |
| DB03662 | PY5 | Vitamin B6 Complexed with 2-Amino-Pentanoic Acid | 3 |
| DB04063 | 2ML | alpha-Methylleucine | 3 |
| DB01993 | PDD | N-(5'-Phosphopyridoxyl)-D-Alanine | 2 |
| DB02824 | PLG | N-Pyridoxyl-Glycine-5-Monophosphate | 2 |
| DB03787 | LCS | (5-Hydroxy-6-methyl-4-{[(E)-(3-oxo-1,2-oxazolidin-4-ylidene)amino]methyl}-3-pyridinyl)methyl dihydrogen phosphate | 2 |
| DB04762 | PDG | N-PYRIDOXYL-D-GLUTAMIC ACID-5'-MONOPHOSPHATE | 2 |
| DB02054 | GAB | Gabaculine | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| PLP | PYRIDOXAL-5'-PHOSPHATE | 158 |
| CL | CHLORIDE ION | 25 |
| PMP | 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE | 20 |
| 9HC | [4-[3-(4-bromophenyl)-3-oxidanylidene-propyl]-6-methyl-5-oxidanyl-pyridin-3-yl]methyl phosphate | 12 |
| ALA | ALANINE | 12 |
| PXG | 3-[O-PHOSPHONOPYRIDOXYL]--AMINO-BENZOIC ACID | 9 |
| FUD | D-fructose | 8 |
| IOD | IODIDE ION | 8 |
| OCF | 3-[(~{E})-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]oxypropanoic acid | 7 |
| 4MV | 4-METHYL VALERIC ACID | 6 |
| AKG | 2-OXOGLUTARIC ACID | 6 |
| PPE | 4-[(1,3-DICARBOXY-PROPYLAMINO)-METHYL]-3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDINIUM | 6 |
| NAmetal | SODIUM ION | 4 |
| PW0 | (~{Z})-2-[[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylamino]pent-2-enedioic acid | 4 |
| UNL | Unknown ligand | 4 |
| ZXN | [6-methyl-5-oxidanyl-4-[(2-phenylhydrazinyl)methyl]pyridin-3-yl]methyl dihydrogen phosphate | 4 |
| 2ML | 2-METHYLLEUCINE | 3 |
| DCS | D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE | 3 |
| GBN | [1-(AMINOMETHYL)CYCLOHEXYL]ACETIC ACID | 3 |
| GUA | GLUTARIC ACID | 3 |