T-group (topology)
4033.1.1 Acyl-CoA dehydrogenase N-terminal domain-like
Ligands and drugs
1,559
Member domains
445
with ligand contacts (≤ 4 Å)
28.5% of members
456
with DrugDomain annotations
29.2% of members
388
with a DrugBank compound
24.9% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 4033.1.1 belongs to X-group 4033 Acyl-CoA dehydrogenase N-terminal domain-like, which binds 7.4 ligand superclasses per 20 proteins, narrower than 55% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB03147 | FAD | Flavin adenine dinucleotide | 289 |
| DB03247 | FMN | Flavin mononucleotide | 34 |
| DB03059 | CAA | Acetoacetyl-CoA | 9 |
| DB04036 | COS | Coenzyme A persulfide | 9 |
| DB04532 | IND | Indole | 7 |
| DB02910 | CO8 | Octanoyl-Coenzyme A | 6 |
| DB03103 | TYD | Thymidine-5'- Diphosphate | 5 |
| DB03415 | CS8 | 3-thiaoctanoyl-CoA | 5 |
| DB00127 | SPM | Spermine | 4 |
| DB02078 | PG5 | Triglyme | 4 |
| DB03796 | PLM | Palmitic Acid | 4 |
| DB01675 | 2MC | Methacrylyl-Coenzyme A | 2 |
| DB03017 | DAO | Lauric acid | 2 |
| DB03600 | DKA | Capric acid | 2 |
| DB04519 | OCA | Caprylic acid | 2 |
| DB07930 | HXD | (3R)-3-HYDROXYDODECANOIC ACID | 2 |
| DB08231 | MYR | Myristic acid | 2 |
| DB00139 | SIN | Succinic acid | 1 |
| DB00157 | — | NADH | 1 |
| DB00167 | — | Isoleucine | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| FAD | FLAVIN-ADENINE DINUCLEOTIDE | 194 |
| FMN | FLAVIN MONONUCLEOTIDE | 34 |
| CL | CHLORIDE ION | 31 |
| FDA | DIHYDROFLAVINE-ADENINE DINUCLEOTIDE | 20 |
| CO8 | OCTANOYL-COENZYME A | 10 |
| DAO | LAURIC ACID | 10 |
| N6C | 1-nitrohexane | 8 |
| SF4 | IRON/SULFUR CLUSTER | 8 |
| IND | INDOLE | 7 |
| 4HP | 4-HYDROXYPHENYLACETATE | 6 |
| CAA | ACETOACETYL-COENZYME A | 6 |
| IOD | IODIDE ION | 6 |
| CAmetal | CALCIUM ION | 5 |
| TYD | THYMIDINE-5'-DIPHOSPHATE | 5 |
| UNX | UNKNOWN ATOM OR ION | 5 |
| 4KW | 1-monoenoyl-CoA | 4 |
| 83U | dibenzothiophene 5-oxide | 4 |
| CNX | heptanenitrile | 4 |
| CS8 | 3-THIAOCTANOYL-COENZYME A | 4 |
| GRA | glutaryl-coenzyme A | 4 |