ECOD
F-group (family)

4052.1.1.1 Acyl-CoA_dh_M

Open in classification tree →Pfam PF02770 →

Ligands and drugs

1,250
Member domains
422
with ligand contacts (≤ 4 Å)
33.8% of members
364
with DrugDomain annotations
29.1% of members
317
with a DrugBank compound
25.4% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 4052.1.1.1 belongs to X-group 4052 Acyl-CoA dehydrogenase middle domain-like, which binds 6.8 ligand superclasses per 20 proteins, narrower than 64% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB03147FADFlavin adenine dinucleotide260
DB01992COACoenzyme A29
DB03247FMNFlavin mononucleotide22
DB04036COSCoenzyme A persulfide18
DB03059CAAAcetoacetyl-CoA9
DB02910CO8Octanoyl-Coenzyme A6
DB04532INDIndole6
DB03103TYDThymidine-5'- Diphosphate5
DB03415CS83-thiaoctanoyl-CoA5
DB03796PLMPalmitic Acid4
DB016752MCMethacrylyl-Coenzyme A3
DB00172PROProline2
DB03017DAOLauric acid2
DB03568BUAButyric Acid2
DB03600DKACapric acid2
DB04519OCACaprylic acid2
DB07930HXD(3R)-3-HYDROXYDODECANOIC ACID2
DB08231MYRMyristic acid2
DB08685UFO1-(1,4-dimethyl-1,2,3,4-tetrahydroquinoxalin-6-yl)methanamine2
DB090387R3Empagliflozin2

Most frequently bound compounds

PDB ligandNameDomains in contact
FADFLAVIN-ADENINE DINUCLEOTIDE317
COACOENZYME A33
FDADIHYDROFLAVINE-ADENINE DINUCLEOTIDE31
CLCHLORIDE ION25
FMNFLAVIN MONONUCLEOTIDE21
COSCOENZYME A PERSULFIDE17
CAAACETOACETYL-COENZYME A10
CO8OCTANOYL-COENZYME A8
DAOLAURIC ACID6
INDINDOLE6
IODIODIDE ION6
TYDTHYMIDINE-5'-DIPHOSPHATE5
4KW1-monoenoyl-CoA4
83Udibenzothiophene 5-oxide4
CS83-THIAOCTANOYL-COENZYME A4
GRAglutaryl-coenzyme A4
PLMPALMITIC ACID4
QQQ1-(1-methylethyl)-1H-benzimidazole-2-sulfonic acid4
ST9STEAROYL-COENZYME A4
UNXUNKNOWN ATOM OR ION4