T-group (topology)
4300.1.1 Viral glycoprotein ectodomain-like
Ligands and drugs
190
Member domains
75
with ligand contacts (≤ 4 Å)
39.5% of members
47
with DrugDomain annotations
24.7% of members
37
with a DrugBank compound
19.5% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 4300.1.1 belongs to X-group 4300 Viral glycoprotein ectodomain-like, which has 13 proteins with classified ligands. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00141 | NAG | N-Acetylglucosamine | 37 |
| DB04481 | MRY | Erythritol | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| NAG | 2-acetamido-2-deoxy-beta-D-glucopyranose | 65 |
| CAmetal | CALCIUM ION | 8 |
| CL | CHLORIDE ION | 6 |
| NAmetal | SODIUM ION | 3 |
| MRY | MESO-ERYTHRITOL | 2 |
| HGmetal | MERCURY (II) ION | 1 |
| MGmetal | MAGNESIUM ION | 1 |
| TBmetal | TERBIUM(III) ION | 1 |
| YBmetal | YTTERBIUM (III) ION | 1 |