F-group (family)
4964.1.1.3 N4_RNAP_helical
Ligands and drugs
23
Member domains
9
with ligand contacts (≤ 4 Å)
39.1% of members
9
with DrugDomain annotations
39.1% of members
8
with a DrugBank compound
34.8% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 4964.1.1.3 belongs to X-group 4964 helical bundle in Bacillus stearothermophilus-like DNA polymerase I, which has 16 proteins with classified ligands. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB04137 | GTP | Guanosine-5'-Triphosphate | 3 |
| DB00171 | ATP | ATP | 2 |
| DB00131 | AMP | Adenosine phosphate | 1 |
| DB01972 | 5GP | Guanosine-5'-Monophosphate | 1 |
| DB03532 | G2P | Phosphomethylphosphonic acid guanylate ester | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| POP | PYROPHOSPHATE 2- | 3 |
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 2 |
| G2P | PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER | 2 |
| GTP | GUANOSINE-5'-TRIPHOSPHATE | 2 |
| AMP | ADENOSINE MONOPHOSPHATE | 1 |