F-group (family)
5.1.3.2 Ldl_recept_b
Ligands and drugs
198
Member domains
27
with ligand contacts (≤ 4 Å)
13.6% of members
20
with DrugDomain annotations
10.1% of members
14
with a DrugBank compound
7.1% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 5.1.3.2 belongs to X-group 5 beta-propeller-like, which binds 7.8 ligand superclasses per 20 proteins, broader than 52% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00141 | NAG | N-Acetylglucosamine | 10 |
| DB04473 | FUC | alpha-L-fucose | 2 |
| DB00364 | — | — | 1 |
| DB03017 | — | Lauric acid | 1 |
| DB04454 | — | Alpha-Aminobutyric Acid | 1 |
| DB11973 | — | — | 1 |
| DB12843 | — | — | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| NAG | 2-acetamido-2-deoxy-beta-D-glucopyranose | 15 |
| CAmetal | CALCIUM ION | 5 |
| CL | CHLORIDE ION | 2 |
| FUC | alpha-L-fucopyranose | 2 |
| MGmetal | MAGNESIUM ION | 2 |
| NAmetal | SODIUM ION | 2 |
| CDmetal | CADMIUM ION | 1 |
| KEG | 12-TUNGSTOPHOSPHATE | 1 |
| NImetal | NICKEL (II) ION | 1 |