F-group (family)
5.1.3.28 BNR_3
Ligands and drugs
536
Member domains
53
with ligand contacts (≤ 4 Å)
9.9% of members
52
with DrugDomain annotations
9.7% of members
39
with a DrugBank compound
7.3% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 5.1.3.28 belongs to X-group 5 beta-propeller-like, which binds 7.8 ligand superclasses per 20 proteins, broader than 52% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB03991 | DAN | 2-deoxy-2,3-dehydro-N-acetylneuraminic acid | 13 |
| DB04694 | FKD | 2,6-anhydro-3-deoxy-3-fluoronononic acid | 5 |
| DB04211 | FSI | 5-(acetylamino)-3,5-dideoxy-3-fluoro-D-erythro-alpha-L-manno-non-2-ulopyranosonic acid | 3 |
| DB00141 | NAG | N-Acetylglucosamine | 1 |
| DB01768 | MUS | Methylumbelliferyl sialic acid | 1 |
| DB03721 | SIA | N-acetyl-alpha-neuraminic acid | 1 |
| DB04561 | AXP | 4-acetamido-2,4-didexoy-D-glycero-beta-D-galacto-octopyranosylphosphonic acid | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| DAN | 2-DEOXY-2,3-DEHYDRO-N-ACETYL-NEURAMINIC ACID | 13 |
| NAmetal | SODIUM ION | 9 |
| FKD | 3-deoxy-3-fluoro-D-erythro-alpha-L-manno-non-2-ulopyranosonic acid | 5 |
| Kmetal | POTASSIUM ION | 5 |
| CAmetal | CALCIUM ION | 4 |
| GC9 | 2,6-anhydro-3,5-dideoxy-5-[(hydroxyacetyl)amino]-D-glycero-L-altro-non-2-enonic acid | 4 |
| KFN | 2,6-anhydro-3-deoxy-D-glycero-D-galacto-non-2-enonic acid | 4 |
| FSI | 5-acetamido-3,5-dideoxy-3-fluoro-D-erythro-alpha-L-manno-non-2-ulopyranosonic acid | 3 |
| KDM | deamino-alpha-neuraminic acid | 3 |
| CL | CHLORIDE ION | 2 |
| NAG | 2-acetamido-2-deoxy-beta-D-glucopyranose | 2 |
| BFN | 5-acetamido-9-(benzoylamino)-3,5,9-trideoxy-3-fluoro-D-erythro-alpha-L-manno-non-2-ulopyranosonic acid | 1 |
| EQP | (1R)-4-acetamido-1,5-anhydro-2,4-dideoxy-1-phosphono-D-glycero-D-galacto-octitol | 1 |
| MUS | 4-METHYL-2-OXO-2H-CHROMEN-7-YL 5-(ACETYLAMINO)-3,5-DIDEOXY-L-ERYTHRO-NON-2-ULOPYRANOSIDONIC ACID | 1 |
| R8T | (3~{S},4~{S},5~{R})-4-acetamido-3-oxidanyl-5-[(1~{S},2~{R})-1,2,3-tris(oxidanyl)propyl]cyclohexane-1-carboxylic acid | 1 |
| SIA | N-acetyl-alpha-neuraminic acid | 1 |