F-group (family)
5.1.4.1 WD40
Ligands and drugs
5,404
Member domains
314
with ligand contacts (≤ 4 Å)
5.8% of members
268
with DrugDomain annotations
5.0% of members
88
with a DrugBank compound
1.6% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 5.1.4.1 belongs to X-group 5 beta-propeller-like, which binds 7.8 ligand superclasses per 20 proteins, broader than 52% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB00128 | ASP | Aspartic acid | 2 |
| DB00637 | XB7 | Astemizole | 2 |
| DB04137 | GTP | Guanosine-5'-Triphosphate | 2 |
| DB14799 | CJD | PF-06821497 | 2 |
| DB19205 | EJR | MAK-683 | 2 |
| DB00118 | SAM | Ademetionine | 1 |
| DB02618 | NDS | Ethyl Dimethyl Ammonio Propane Sulfonate | 1 |
| DB04237 | TAM | Tris(Hydroxyethyl)Aminomethane | 1 |
| DB04447 | DTT | 1,4-Dithiothreitol | 1 |
| DB08235 | — | N-[2-(2-methyl-1H-indol-3-yl)ethyl]thiophene-2-carboxamide | 1 |
| DB08236 | — | (2S)-2-(3-bromophenyl)-3-(5-chloro-2-hydroxyphenyl)-1,3-thiazolidin-4-one | 1 |
| DB09130 | — | — | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| OHX | osmium (III) hexammine | 70 |
| UNX | UNKNOWN ATOM OR ION | 20 |
| CL | CHLORIDE ION | 17 |
| CAmetal | CALCIUM ION | 14 |
| MGmetal | MAGNESIUM ION | 11 |
| L9W | N-(2,3-dihydro-1-benzofuran-4-ylmethyl)-8-(4-methylsulfonylphenyl)-[1,2,4]triazolo[4,3-c]pyrimidin-5-amine | 7 |
| NAmetal | SODIUM ION | 6 |
| Kmetal | POTASSIUM ION | 5 |
| MNmetal | MANGANESE (II) ION | 5 |
| 6BN | 5,8-dichloro-2-[(4-ethyl-6-methyl-2-oxo-1,2-dihydropyridin-3-yl)methyl]-7-({1-[(2R)-2-hydroxypropanoyl]piperidin-4-yl}oxy)-3,4-dihydroisoquinolin-1(2H)-one | 4 |
| 74D | 1-[(1~{R})-1-[1-[2,2-bis(fluoranyl)propyl]piperidin-4-yl]ethyl]-~{N}-[(4-methoxy-6-methyl-2-oxidanylidene-3~{H}-pyridin-3-yl)methyl]-2-methyl-indole-3-carboxamide | 4 |
| ADP | ADENOSINE-5'-DIPHOSPHATE | 4 |
| 73K | N-(furan-2-ylmethyl)-8-(4-methylsulfonylphenyl)-[1,2,4]triazolo[4,3-c]pyrimidin-5-amine | 3 |
| LQD | (3R,4S)-1-[(2-methoxyphenyl)methyl]-N,N-dimethyl-4-(1-methylindol-3-yl)pyrrolidin-3-amine | 3 |
| ZI3 | N-[3-(4-chlorophenyl)oxetan-3-yl]-1-propanoyl-1,2,3,4-tetrahydroquinoline-5-carboxamide | 3 |
| ZI8 | N-[3-(4-chlorophenyl)oxetan-3-yl]-4-[(3S)-3-hydroxypyrrolidin-1-yl]benzamide | 3 |
| ZNmetal | ZINC ION | 3 |
| 7W7 | (3R)-3-[(2H-1,3-benzodioxol-4-yl)methyl]piperidine-1-carboximidamide | 2 |
| 7WD | (6S)-6-[(2H-1,3-benzodioxol-4-yl)methyl]-5,6,7,8-tetrahydroimidazo[1,5-a]pyridin-3-amine | 2 |
| A1BBV | N-(1-benzoyl-1,2,3,4-tetrahydroquinolin-6-yl)-2-(3-cyano-2-methoxyphenyl)acetamide | 2 |