F-group (family)
5037.1.1.2 PsaA_PsaB
Ligands and drugs
733
Member domains
475
with ligand contacts (≤ 4 Å)
64.8% of members
363
with DrugDomain annotations
49.5% of members
363
with a DrugBank compound
49.5% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 5037.1.1.2 belongs to X-group 5037 Bacterial photosystem II reaction centre L and M subunits-like, which binds 5.9 ligand superclasses per 20 proteins, narrower than 75% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB01022 | PQN | Phylloquinone | 344 |
| DB06755 | BCR | Beta carotene | 329 |
| DB02133 | CLA | Chlorophyll A | 303 |
| DB02043 | LHG | 1,2-Dipalmitoyl-Phosphatidyl-Glycerole | 233 |
| DB03426 | DGD | Digalactosyl Diacyl Glycerol (Dgdg) | 64 |
| DB01853 | BCL | Bacteriochlorophyll A | 10 |
| DB00137 | LUT | (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL | 8 |
| DB03279 | LMU | Dodecyl-Alpha-D-Maltoside | 8 |
| DB15914 | RRX | Cryptoxanthin | 8 |
| DB12148 | 1L3 | Menatetrenone | 6 |
| DB04450 | HTG | Heptyl 1-Thiohexopyranoside | 5 |
| DB01707 | LAP | L-Alfa-Lysophosphatidylcholine, Lauroyl | 4 |
| DB03690 | PCW | (Z,Z)-4-Hydroxy-N,N,N-Trimethyl-10-Oxo-7-[(1-Oxo-9-Octadecenyl)Oxy]-3,5,9-Trioxa-4-Phosphaheptacos-18-En-1-Aminium-4-Oxide | 3 |
| DB03429 | CDL | Tetrastearoyl cardiolipin | 2 |
| DB03979 | DGG | 1-[Glycerolylphosphonyl]-2-[8-(2-Hexyl-Cyclopropyl)-Octanal-1-Yl]-3-[Hexadecanal-1-Yl]-Glycerol | 1 |
| DB04506 | CHL | Chlorophyll B | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| SF4 | IRON/SULFUR CLUSTER | 462 |
| CLA | CHLOROPHYLL A | 457 |
| PQN | PHYLLOQUINONE | 442 |
| BCR | BETA-CAROTENE | 420 |
| LHG | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE | 306 |
| CL0 | CHLOROPHYLL A ISOMER | 264 |
| LMG | 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE | 219 |
| DGD | DIGALACTOSYL DIACYL GLYCEROL (DGDG) | 107 |
| CAmetal | CALCIUM ION | 41 |
| F6C | Chlorophyll F | 27 |
| CL | CHLORIDE ION | 23 |
| UNL | Unknown ligand | 17 |
| SQD | 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL | 16 |
| LMU | DODECYL-ALPHA-D-MALTOSIDE | 15 |
| 45D | beta,beta-carotene-4,4'-dione | 14 |
| 8CT | (6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene | 14 |
| BCL | BACTERIOCHLOROPHYLL A | 14 |
| ZEX | (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol | 13 |
| WVN | 1,3,3-trimethyl-2-[(1E,3E,5E,7E,9E,11E,13E,15E,17E)-3,7,12,16-tetramethyl-18-[(1R)-2,6,6-trimethylcyclohex-2-en-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohexene | 12 |
| F39 | [(2R,3S,4S,5R,6R)-6-[(10E,12E,14E)-2,6,10,14,19,23-hexamethyl-25-(2,3,6-trimethylphenyl)pentacosa-6,8,10,12,14,16,18,20,22,24-decaen-2-yl]oxy-3,4,5-tris(oxidanyl)oxan-2-yl]methyl dodecanoate | 10 |