F-group (family)
5075.1.1.2 PSII
Ligands and drugs
1,108
Member domains
852
with ligand contacts (≤ 4 Å)
76.9% of members
594
with DrugDomain annotations
53.6% of members
582
with a DrugBank compound
52.5% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 5075.1.1.2 belongs to X-group 5075 Photosystem II antenna protein-like, which binds 6.0 ligand superclasses per 20 proteins, narrower than 75% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02133 | CLA | Chlorophyll A | 564 |
| DB06755 | BCR | Beta carotene | 539 |
| DB03426 | DGD | Digalactosyl Diacyl Glycerol (Dgdg) | 451 |
| DB02043 | LHG | 1,2-Dipalmitoyl-Phosphatidyl-Glycerole | 427 |
| DB04450 | HTG | Heptyl 1-Thiohexopyranoside | 112 |
| DB03317 | HEC | Ferroheme C | 107 |
| DB03193 | STE | Stearic acid | 100 |
| DB18267 | HEM | Ferroheme | 73 |
| DB15914 | RRX | Cryptoxanthin | 43 |
| DB03279 | LMU | Dodecyl-Alpha-D-Maltoside | 37 |
| DB04735 | MGE | Monogalactosyldiacylglycerol | 13 |
| DB04506 | CHL | Chlorophyll B | 8 |
| DB00132 | LNL | alpha-Linolenic acid | 4 |
| DB00137 | LUT | (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL | 3 |
| DB00163 | VIV | Vitamin E | 2 |
| DB04257 | PAM | Palmitoleic Acid | 2 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| CLA | CHLOROPHYLL A | 814 |
| BCR | BETA-CAROTENE | 787 |
| SQD | 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL | 689 |
| LHG | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE | 671 |
| LMG | 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE | 663 |
| DGD | DIGALACTOSYL DIACYL GLYCEROL (DGDG) | 637 |
| OEX | CA-MN4-O5 CLUSTER | 264 |
| CL | CHLORIDE ION | 248 |
| UNL | Unknown ligand | 219 |
| HTG | heptyl 1-thio-beta-D-glucopyranoside | 168 |
| STE | STEARIC ACID | 107 |
| CAmetal | CALCIUM ION | 88 |
| OEY | CA-MN4-O6 CLUSTER | 54 |
| LMU | DODECYL-ALPHA-D-MALTOSIDE | 46 |
| CL7 | CHLOROPHYLL D | 36 |
| HEM | PROTOPORPHYRIN IX CONTAINING FE | 35 |
| HEC | HEME C | 33 |
| DGA | DIACYL GLYCEROL | 27 |
| CHL | CHLOROPHYLL B | 26 |
| 8CT | (6'R,11cis,11'cis,13cis,15cis)-4',5'-didehydro-5',6'-dihydro-beta,beta-carotene | 24 |