T-group (topology)
627.1.1 VPS9 domain
Ligands and drugs
213
Member domains
8
with ligand contacts (≤ 4 Å)
3.8% of members
8
with DrugDomain annotations
3.8% of members
7
with a DrugBank compound
3.3% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 627.1.1 belongs to X-group 627 VPS9 domain, which has 2 proteins with classified ligands. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB04315 | GDP | Guanosine-5'-Diphosphate | 5 |
| DB02623 | GNH | Aminophosphonic acid-guanylate ester | 2 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| GDP | GUANOSINE-5'-DIPHOSPHATE | 5 |
| GNH | AMINOPHOSPHONIC ACID-GUANYLATE ESTER | 2 |
| CAmetal | CALCIUM ION | 1 |
| MGmetal | MAGNESIUM ION | 1 |