F-group (family)
7523.1.1.8 SBP_bac_1
Ligands and drugs
2,464
Member domains
980
with ligand contacts (≤ 4 Å)
39.8% of members
679
with DrugDomain annotations
27.6% of members
328
with a DrugBank compound
13.3% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 7523.1.1.8 belongs to X-group 7523 Periplasmic binding protein-like II, which binds 8.6 ligand superclasses per 20 proteins, broader than 69% of the 256 X-groups with enough proteins to compare. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB02379 | BGC | Beta-D-Glucose | 10 |
| DB02686 | UMQ | Undecyl-Beta-D-Maltopyranoside | 10 |
| DB16426 | SO2 | Sulfur dioxide | 9 |
| DB00141 | NAG | N-Acetylglucosamine | 5 |
| DB09157 | CO2 | Carbon dioxide | 5 |
| DB03566 | SPD | Spermidine | 4 |
| DB04660 | CH5 | Choline alfoscerate | 4 |
| DB04349 | PGO | (S)-propane-1,2-diol | 3 |
| DB00742 | MTL | Mannitol | 2 |
| DB01694 | TAR | D-tartaric acid | 2 |
| DB01786 | DAL | D-Alanine | 2 |
| DB01917 | PUT | Putrescine | 2 |
| DB02517 | DGL | D-Glutamic Acid | 2 |
| DB03416 | TPS | Thiamine(1+) monophosphate | 2 |
| DB09459 | TLA | L-tartaric acid | 2 |
| DB14704 | RB0 | Ribitol | 2 |
| DB00133 | SER | Serine | 1 |
| DB00142 | GLU | Glutamic acid | 1 |
| DB00145 | GLY | Glycine | 1 |
| DB00172 | PRO | Proline | 1 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ZNmetal | ZINC ION | 135 |
| CL | CHLORIDE ION | 99 |
| CAmetal | CALCIUM ION | 69 |
| NAmetal | SODIUM ION | 52 |
| MGmetal | MAGNESIUM ION | 45 |
| GLC | alpha-D-glucopyranose | 25 |
| GAL | beta-D-galactopyranose | 19 |
| CUmetal | COPPER (II) ION | 16 |
| CO2 | CARBON DIOXIDE | 15 |
| 6AK | 4-{8-chloro-11-[3-(4-chloro-3,5-dimethylphenoxy)propyl]-1-oxo-7-(1,3,5-trimethyl-1H-pyrazol-4-yl)-4,5-dihydro-1H-[1,4]diazepino[1,2-a]indol-2(3H)-yl}-1-methyl-1H-indole-6-carboxylic acid | 12 |
| NImetal | NICKEL (II) ION | 12 |
| SO2 | SULFUR DIOXIDE | 12 |
| BGC | beta-D-glucopyranose | 11 |
| IOD | IODIDE ION | 10 |
| SO3 | SULFITE ION | 10 |
| ZRC | OXO ZIRCONIUM(IV) CLUSTER | 9 |
| FEmetal | FE (III) ION | 6 |
| Kmetal | POTASSIUM ION | 6 |
| NAG | 2-acetamido-2-deoxy-beta-D-glucopyranose | 6 |
| 2ME | METHOXYETHANE | 5 |