ECOD
F-group (family)

7577.1.1.7 Cys_Met_Meta_PP

Open in classification tree →Pfam PF01053 →

Ligands and drugs

758
Member domains
479
with ligand contacts (≤ 4 Å)
63.2% of members
427
with DrugDomain annotations
56.3% of members
352
with a DrugBank compound
46.4% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 7577.1.1.7 belongs to X-group 7577 PLP-dependent transferases, which binds 7.7 ligand superclasses per 20 proteins, broader than 51% of the 256 X-groups with enough proteins to compare. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB00114PLPPyridoxal phosphate155
DB00134METMethionine17
DB00151CYSCysteine16
DB00133SERSerine14
DB02328HEN2-[(3-Hydroxy-2-Methyl-5-Phosphonooxymethyl-Pyridin-4-Ylmethyl)-Imino]-5-Phosphono-Pent-3-Enoic Acid13
DB03928CCOCarboxymethylthio-3-(3-Chlorophenyl)-1,2,4-Oxadiazol13
DB00119PYRPyruvic acid12
DB04406PMC3-(Phosphonomethyl)Pyridine-2-Carboxylic Acid12
DB04422HCSHomocysteine12
DB00145GLYGlycine5
DB04212NAK2-Iminiopropanoate4
DB03345BMEMercaptoethanol3
DB00123LYSLysine2
DB02783IK24'-Deoxy-4'-Acetylyamino-Pyridoxal-5'-Phosphate2
DB03287PPG4-(2-Amino-Ethoxy)-2-[(3-Hydroxy-2-Methyl-5-Phosphonooxymethyl-Pyridin-4-Ylmethyl)-Amino]-but-3-Enoic Acid2
DB03327IN5{1-[(3-Hydroxy-Methyl-5-Phosphonooxy-Methyl-Pyridin-4-Ylmethyl)-Amino]-Ethyl}-Phosphonic Acid2
DB04467PP3N-(5'-phosphopyridoxyl)-L-alanine2
DB045532KT2-Oxobutanoic Acid2
DB15458NLENorleucine2
DB02824PLGN-Pyridoxyl-Glycine-5-Monophosphate1

Most frequently bound compounds

PDB ligandNameDomains in contact
PLPPYRIDOXAL-5'-PHOSPHATE157
4LM(2E)-2-{[(1E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}but-2-enoic acid43
CLCHLORIDE ION30
NAmetalSODIUM ION23
3LM(2E)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]-4-(methylsulfanyl)but-2-enoic acid16
CYSCYSTEINE16
METMETHIONINE16
WBJ(2E)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)imino]but-3-enoic acid16
NLENORLEUCINE15
PY62-[O-PHOSPHONOPYRIDOXYL]-AMINO-HEXANOIC ACID15
SERSERINE14
CCOCARBOXYMETHYLTHIO-3-(3-CHLOROPHENYL)-1,2,4-OXADIAZOL12
HEN2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-IMINO]-5-PHOSPHONO-PENT-3-ENOIC ACID12
PMC3-(PHOSPHONOMETHYL)PYRIDINE-2-CARBOXYLIC ACID12
PYRPYRUVIC ACID12
E9U(2~{S})-4-[(2~{R})-2-azanyl-3-oxidanyl-3-oxidanylidene-propyl]sulfanyl-2-[(~{E})-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]butanoic acid11
HCS2-AMINO-4-MERCAPTO-BUTYRIC ACID11
KOU(E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-serine10
0JO2-{[(E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}prop-2-enoic acid8
2AG(2S)-2-aminopent-4-enoic acid8