F-group (family)
862.1.1.1 DNA_primase_S
Ligands and drugs
220
Member domains
63
with ligand contacts (≤ 4 Å)
28.6% of members
51
with DrugDomain annotations
23.2% of members
32
with a DrugBank compound
14.5% of members
Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.
Chemical profile
Chemical profiles are computed for X-groups. 862.1.1.1 belongs to X-group 862 Prim-pol domain, which has 14 proteins with classified ligands. View its chemical profile →
DrugBank compounds
| DrugBank | PDB ligand | Name | Domains |
|---|---|---|---|
| DB03222 | DTP | dATP | 12 |
| DB04005 | UTP | Uridine 5'-triphosphate | 4 |
| DB00171 | ATP | ATP | 2 |
| DB02596 | APC | alpha,beta-Methyleneadenosine 5'-triphosphate | 2 |
| DB03258 | DCP | 2'-Deoxycytidine 5'-triphosphate | 2 |
Most frequently bound compounds
| PDB ligand | Name | Domains in contact |
|---|---|---|
| ZNmetal | ZINC ION | 45 |
| MNmetal | MANGANESE (II) ION | 14 |
| CAmetal | CALCIUM ION | 12 |
| DTP | 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE | 12 |
| UTP | URIDINE 5'-TRIPHOSPHATE | 4 |
| ATP | ADENOSINE-5'-TRIPHOSPHATE | 3 |
| MGmetal | MAGNESIUM ION | 3 |
| APC | DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER | 2 |
| CDmetal | CADMIUM ION | 2 |
| CL | CHLORIDE ION | 2 |
| DCP | 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE | 2 |
| HEJ | 9-{5-O-[(S)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-arabinofuranosyl}-9H-purin-6-amine | 2 |
| HFD | 2-fluoro-9-{5-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-arabinofuranosyl}-9H-purin-6-amine | 2 |
| JSQ | 2-fluoro-ATP | 2 |