ECOD
F-group (family)

868.1.1.1 CYTH

Open in classification tree →Pfam PF01928 →

Ligands and drugs

153
Member domains
55
with ligand contacts (≤ 4 Å)
35.9% of members
53
with DrugDomain annotations
34.6% of members
40
with a DrugBank compound
26.1% of members

Aggregated over all current member domains of this group. Drug annotations come from DrugDomain; buffers and crystallization additives are excluded from the tables below.

Chemical profile

Chemical profiles are computed for X-groups. 868.1.1.1 belongs to X-group 868 mRNA triphosphatase CET1-related, which has 17 proteins with classified ligands. View its chemical profile →

DrugBank compounds

DrugBankPDB ligandNameDomains
DB038963POTriphosphoric acid11
DB00131AMPAdenosine phosphate4
DB018603ATCordycepin Triphosphate2
DB02527CMPCyclic adenosine monophosphate2
DB02596APCalpha,beta-Methyleneadenosine 5'-triphosphate2
DB00171ATPATP1
DB02219CXS3-(cyclohexylamino)propanesulfonic acid1
DB03725GCP5'-Guanylylmethylenebisphosphonate1

Most frequently bound compounds

PDB ligandNameDomains in contact
3POTRIPHOSPHATE11
MNmetalMANGANESE (II) ION11
MGmetalMAGNESIUM ION9
CLCHLORIDE ION7
NAmetalSODIUM ION6
AMPADENOSINE MONOPHOSPHATE4
CAmetalCALCIUM ION3
UNLUnknown ligand3
3AT3'-DEOXYADENOSINE-5'-TRIPHOSPHATE2
APCDIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER2
CMPADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE2
POPPYROPHOSPHATE 2-2
TPPTHIAMINE DIPHOSPHATE2
UNXUNKNOWN ATOM OR ION2
V4EThiamine Triphosphate2
ATPADENOSINE-5'-TRIPHOSPHATE1
CXS3-CYCLOHEXYL-1-PROPYLSULFONIC ACID1
GCPPHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER1
KmetalPOTASSIUM ION1
PTmetalPLATINUM (II) ION1