ECODEvolutionary Classification of Protein Domains

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PDB 1IJD

X-RAY DIFFRACTION3.00 Å6 chains6 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain ALIGHT-HARVESTING PROTEIN B-800/820, ALPHA CHAINview chain

1 domain

e1ijdA1(A:1-46)

Chain BLIGHT-HARVESTING PROTEIN B-800/820, BETA CHAINview chain

1 domain

e1ijdB1(B:2-40)

Chain CLIGHT-HARVESTING PROTEIN B-800/820, ALPHA CHAINview chain

1 domain

e1ijdC1(C:1-46)

Chain DLIGHT-HARVESTING PROTEIN B-800/820, BETA CHAINview chain

1 domain

e1ijdD1(D:2-40)

Chain ELIGHT-HARVESTING PROTEIN B-800/820, ALPHA CHAINview chain

1 domain

e1ijdE1(E:1-46)

Chain FLIGHT-HARVESTING PROTEIN B-800/820, BETA CHAINview chain

1 domain

e1ijdF1(F:2-40)

All Domains (6)

#	Chain	Domain ID	Range	Family	Classification
1	A	e1ijdA1	A:1-46	LHC	5074 → 5074.1 → 5074.1.1
2	B	e1ijdB1	B:2-40	LHC	5074 → 5074.1 → 5074.1.1
3	C	e1ijdC1	C:1-46	LHC	5074 → 5074.1 → 5074.1.1
4	D	e1ijdD1	D:2-40	LHC	5074 → 5074.1 → 5074.1.1
5	E	e1ijdE1	E:1-46	LHC	5074 → 5074.1 → 5074.1.1
6	F	e1ijdF1	F:2-40	LHC	5074 → 5074.1 → 5074.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors