ECODEvolutionary Classification of Protein Domains

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PDB 3WMM

X-RAY DIFFRACTION3.00 Å36 chains37 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 0LH1 beta polypeptideview chain

1 domain

e3wmm01(0:7-46)

Chain 1LH1 alpha polypeptideview chain

1 domain

e3wmm11(1:2-61)

Chain 2LH1 beta polypeptideview chain

1 domain

e3wmm21(2:7-46)

Chain 3LH1 alpha polypeptideview chain

1 domain

e3wmm31(3:2-61)

Chain 4LH1 beta polypeptideview chain

1 domain

e3wmm41(4:7-46)

Chain 5LH1 alpha polypeptideview chain

1 domain

e3wmm51(5:2-61)

Chain 6LH1 beta polypeptideview chain

1 domain

e3wmm61(6:7-46)

Chain 7LH1 alpha polypeptideview chain

1 domain

e3wmm71(7:2-61)

Chain 8LH1 beta polypeptideview chain

1 domain

e3wmm81(8:7-46)

Chain 9LH1 alpha polypeptideview chain

1 domain

e3wmm91(9:2-61)

Chain ALH1 alpha polypeptideview chain

1 domain

e3wmmA1(A:2-61)

Chain BLH1 beta polypeptideview chain

1 domain

e3wmmB1(B:7-46)

Chain CPhotosynthetic reaction center C subunitview chain

1 domain

e3wmmC1(C:17-333)

Chain DLH1 alpha polypeptideview chain

1 domain

e3wmmD1(D:2-61)

Chain ELH1 beta polypeptideview chain

1 domain

e3wmmE1(E:7-46)

Chain FLH1 alpha polypeptideview chain

1 domain

e3wmmF1(F:2-61)

Chain GLH1 beta polypeptideview chain

1 domain

e3wmmG1(G:7-46)

Chain HPhotosynthetic reaction center H subunitview chain

2 domains

e3wmmH1(H:35-259)e3wmmH2(H:2-34)

Chain ILH1 alpha polypeptideview chain

1 domain

e3wmmI1(I:2-61)

Chain JLH1 beta polypeptideview chain

1 domain

e3wmmJ1(J:7-46)

Chain KLH1 alpha polypeptideview chain

1 domain

e3wmmK1(K:2-61)

Chain LPhotosynthetic reaction center L subunitview chain

1 domain

e3wmmL1(L:2-281)

Chain MPhotosynthetic reaction center M subunitview chain

1 domain

e3wmmM1(M:2-320)

Chain NLH1 beta polypeptideview chain

1 domain

e3wmmN1(N:7-46)

Chain OLH1 alpha polypeptideview chain

1 domain

e3wmmO1(O:2-61)

Chain PLH1 beta polypeptideview chain

1 domain

e3wmmP1(P:7-46)

Chain QLH1 alpha polypeptideview chain

1 domain

e3wmmQ1(Q:2-61)

Chain RLH1 beta polypeptideview chain

1 domain

e3wmmR1(R:7-46)

Chain SLH1 alpha polypeptideview chain

1 domain

e3wmmS1(S:2-61)

Chain TLH1 beta polypeptideview chain

1 domain

e3wmmT1(T:7-46)

Chain ULH1 alpha polypeptideview chain

1 domain

e3wmmU1(U:2-61)

Chain VLH1 beta polypeptideview chain

1 domain

e3wmmV1(V:7-46)

Chain WLH1 alpha polypeptideview chain

1 domain

e3wmmW1(W:2-61)

Chain XLH1 beta polypeptideview chain

1 domain

e3wmmX1(X:7-46)

Chain YLH1 alpha polypeptideview chain

1 domain

e3wmmY1(Y:2-61)

Chain ZLH1 beta polypeptideview chain

1 domain

e3wmmZ1(Z:7-46)

All Domains (37)

#	Chain	Domain ID	Range	Family	Classification
1	0	e3wmm01	0:7-46	LHC	5074 → 5074.1 → 5074.1.1
2	1	e3wmm11	1:2-61	LHC	5074 → 5074.1 → 5074.1.1
3	2	e3wmm21	2:7-46	LHC	5074 → 5074.1 → 5074.1.1
4	3	e3wmm31	3:2-61	LHC	5074 → 5074.1 → 5074.1.1
5	4	e3wmm41	4:7-46	LHC	5074 → 5074.1 → 5074.1.1
6	5	e3wmm51	5:2-61	LHC	5074 → 5074.1 → 5074.1.1
7	6	e3wmm61	6:7-46	LHC	5074 → 5074.1 → 5074.1.1
8	7	e3wmm71	7:2-61	LHC	5074 → 5074.1 → 5074.1.1
9	8	e3wmm81	8:7-46	LHC	5074 → 5074.1 → 5074.1.1
10	9	e3wmm91	9:2-61	LHC	5074 → 5074.1 → 5074.1.1
11	A	e3wmmA1	A:2-61	LHC	5074 → 5074.1 → 5074.1.1
12	B	e3wmmB1	B:7-46	LHC	5074 → 5074.1 → 5074.1.1
13	C	e3wmmC1	C:17-333	CytoC_RC	139 → 139.3 → 139.3.1
14	D	e3wmmD1	D:2-61	LHC	5074 → 5074.1 → 5074.1.1
15	E	e3wmmE1	E:7-46	LHC	5074 → 5074.1 → 5074.1.1
16	F	e3wmmF1	F:2-61	LHC	5074 → 5074.1 → 5074.1.1
17	G	e3wmmG1	G:7-46	LHC	5074 → 5074.1 → 5074.1.1
18	H	e3wmmH1	H:35-259	Photosynthetic reaction centre, H-chain N-terminal region / PRC-barrel domain	4 → 4.6 → 4.6.1
19	H	e3wmmH2	H:2-34	PRCH	5002 → 5002.1 → 5002.1.1
20	I	e3wmmI1	I:2-61	LHC	5074 → 5074.1 → 5074.1.1
21	J	e3wmmJ1	J:7-46	LHC	5074 → 5074.1 → 5074.1.1
22	K	e3wmmK1	K:2-61	LHC	5074 → 5074.1 → 5074.1.1
23	L	e3wmmL1	L:2-281	Photo_RC	5037 → 5037.1 → 5037.1.1
24	M	e3wmmM1	M:2-320	Photo_RC	5037 → 5037.1 → 5037.1.1
25	N	e3wmmN1	N:7-46	LHC	5074 → 5074.1 → 5074.1.1
26	O	e3wmmO1	O:2-61	LHC	5074 → 5074.1 → 5074.1.1
27	P	e3wmmP1	P:7-46	LHC	5074 → 5074.1 → 5074.1.1
28	Q	e3wmmQ1	Q:2-61	LHC	5074 → 5074.1 → 5074.1.1
29	R	e3wmmR1	R:7-46	LHC	5074 → 5074.1 → 5074.1.1
30	S	e3wmmS1	S:2-61	LHC	5074 → 5074.1 → 5074.1.1
31	T	e3wmmT1	T:7-46	LHC	5074 → 5074.1 → 5074.1.1
32	U	e3wmmU1	U:2-61	LHC	5074 → 5074.1 → 5074.1.1
33	V	e3wmmV1	V:7-46	LHC	5074 → 5074.1 → 5074.1.1
34	W	e3wmmW1	W:2-61	LHC	5074 → 5074.1 → 5074.1.1
35	X	e3wmmX1	X:7-46	LHC	5074 → 5074.1 → 5074.1.1
36	Y	e3wmmY1	Y:2-61	LHC	5074 → 5074.1 → 5074.1.1
37	Z	e3wmmZ1	Z:7-46	LHC	5074 → 5074.1 → 5074.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors