Home/PDB

PDB 5MDX

ELECTRON MICROSCOPY50 chains52 ECOD domains
View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

Chain 1Chlorophyll a-b binding protein 1, chloroplasticview chain
1 domain
Chain 2Chlorophyll a-b binding protein 1, chloroplasticview chain
1 domain
Chain 3Chlorophyll a-b binding protein 1, chloroplasticview chain
1 domain
Chain 4Chlorophyll a-b binding protein, chloroplasticview chain
1 domain
Chain 5Chlorophyll a-b binding protein 1, chloroplasticview chain
1 domain
Chain 6Chlorophyll a-b binding protein 1, chloroplasticview chain
1 domain
Chain 7Chlorophyll a-b binding protein 1, chloroplasticview chain
1 domain
Chain 8Chlorophyll a-b binding protein, chloroplasticview chain
1 domain
Chain aPhotosystem II protein D1view chain
1 domain
Chain APhotosystem II protein D1view chain
1 domain
Chain bPhotosystem II CP47 reaction center proteinview chain
2 domains
Chain BPhotosystem II CP47 reaction center proteinview chain
2 domains
Chain cPhotosystem II CP43 reaction center proteinview chain
1 domain
Chain CPhotosystem II CP43 reaction center proteinview chain
1 domain
Chain dPhotosystem II D2 proteinview chain
1 domain
Chain DPhotosystem II D2 proteinview chain
1 domain
Chain eCytochrome b559 subunit alphaview chain
1 domain
Chain ECytochrome b559 subunit alphaview chain
1 domain
Chain fCytochrome b559 subunit beta (PsbF)view chain
1 domain
Chain FCytochrome b559 subunit beta (PsbF)view chain
1 domain
Chain gChlorophyll a-b binding protein 1, chloroplasticview chain
1 domain
Chain GChlorophyll a-b binding protein 1, chloroplasticview chain
1 domain
Chain hPhotosystem II reaction center protein Hview chain
1 domain
Chain HPhotosystem II reaction center protein Hview chain
1 domain
Chain iPhotosystem II reaction center protein Iview chain
1 domain
Chain IPhotosystem II reaction center protein Iview chain
1 domain
Chain kPhotosystem II reaction center protein Kview chain
1 domain
Chain KPhotosystem II reaction center protein Kview chain
1 domain
Chain lPhotosystem II reaction center protein Lview chain
1 domain
Chain LPhotosystem II reaction center protein Lview chain
1 domain
Chain mPhotosystem II reaction center protein Mview chain
1 domain
Chain MPhotosystem II reaction center protein Mview chain
1 domain
Chain nChlorophyll a-b binding protein 1, chloroplasticview chain
1 domain
Chain NChlorophyll a-b binding protein 1, chloroplasticview chain
1 domain
Chain oOxygen-evolving enhancer protein 1-1, chloroplasticview chain
1 domain
Chain OOxygen-evolving enhancer protein 1-1, chloroplasticview chain
1 domain
Chain rChlorophyll a-b binding protein CP29.1, chloroplasticview chain
1 domain
Chain RChlorophyll a-b binding protein CP29.1, chloroplasticview chain
1 domain
Chain sChlorophyll a-b binding protein CP26, chloroplasticview chain
1 domain
Chain SChlorophyll a-b binding protein CP26, chloroplasticview chain
1 domain
Chain tPhotosystem II reaction center protein Tview chain
1 domain
Chain TPhotosystem II reaction center protein Tview chain
1 domain
Chain wPhotosystem II reaction center W protein, chloroplasticview chain
1 domain
Chain WPhotosystem II reaction center W protein, chloroplasticview chain
1 domain
Chain xPhotosystem II reaction center protein Xview chain
1 domain
Chain XPhotosystem II reaction center protein Xview chain
1 domain
Chain yChlorophyll a-b binding protein 1, chloroplasticview chain
1 domain
Chain YChlorophyll a-b binding protein 1, chloroplasticview chain
1 domain
Chain zPhotosystem II reaction center protein Zview chain
1 domain
Chain ZPhotosystem II reaction center protein Zview chain
1 domain

All Domains (52)

#ChainDomain IDRangeFamilyClassification
11e5mdx111:48-266Chloroa_b-bind5077 → 5077.1 → 5077.1.1
22e5mdx212:48-266Chloroa_b-bind5077 → 5077.1 → 5077.1.1
33e5mdx313:48-266Chloroa_b-bind5077 → 5077.1 → 5077.1.1
44e5mdx414:54-257Chloroa_b-bind5077 → 5077.1 → 5077.1.1
55e5mdx515:48-266Chloroa_b-bind5077 → 5077.1 → 5077.1.1
66e5mdx616:48-266Chloroa_b-bind5077 → 5077.1 → 5077.1.1
77e5mdx717:48-266Chloroa_b-bind5077 → 5077.1 → 5077.1.1
88e5mdx818:54-257Chloroa_b-bind5077 → 5077.1 → 5077.1.1
9ae5mdxa1a:11-340Photo_RC5037 → 5037.1 → 5037.1.1
10Ae5mdxA1A:11-13,A:36-340Photo_RC5037 → 5037.1 → 5037.1.1
11be5mdxb1b:329-444PSII3744 → 3744.1 → 3744.1.1
12be5mdxb2b:2-328,b:445-479PSII5075 → 5075.1 → 5075.1.1
13Be5mdxB1B:2-328,B:445-479PSII5075 → 5075.1 → 5075.1.1
14Be5mdxB2B:329-444PSII3744 → 3744.1 → 3744.1.1
15ce5mdxc1c:24-472PSII5075 → 5075.1 → 5075.1.1
16Ce5mdxC1C:24-472PSII5075 → 5075.1 → 5075.1.1
17de5mdxd1d:16-351Photo_RC5037 → 5037.1 → 5037.1.1
18De5mdxD1D:16-351Photo_RC5037 → 5037.1 → 5037.1.1
19ee5mdxe1e:10-81Cytochrom_B559,Cytochrom_B559a5036 → 5036.1 → 5036.1.1
20Ee5mdxE1E:10-81Cytochrom_B559,Cytochrom_B559a5036 → 5036.1 → 5036.1.1
21fe5mdxf1f:11-39Cytochrom_B5595036 → 5036.1 → 5036.1.1
22Fe5mdxF1F:11-39Cytochrom_B5595036 → 5036.1 → 5036.1.1
23ge5mdxg1g:48-266Chloroa_b-bind5077 → 5077.1 → 5077.1.1
24Ge5mdxG1G:48-266Chloroa_b-bind5077 → 5077.1 → 5077.1.1
25he5mdxh1h:14-65PsbH5032 → 5032.1 → 5032.1.1
26He5mdxH1H:14-65PsbH5032 → 5032.1 → 5032.1.1
27ie5mdxi1i:1-35PsbI5035 → 5035.1 → 5035.1.1
28Ie5mdxI1I:1-35PsbI5035 → 5035.1 → 5035.1.1
29ke5mdxk1k:25-60PsbK5034 → 5034.1 → 5034.1.1
30Ke5mdxK1K:25-60PsbK5034 → 5034.1 → 5034.1.1
31le5mdxl1l:3-38PsbL5030 → 5030.1 → 5030.1.1
32Le5mdxL1L:3-38PsbL5030 → 5030.1 → 5030.1.1
33me5mdxm1m:4-32PsbM5033 → 5033.1 → 5033.1.1
34Me5mdxM1M:4-32PsbM5033 → 5033.1 → 5033.1.1
35ne5mdxn1n:48-266Chloroa_b-bind5077 → 5077.1 → 5077.1.1
36Ne5mdxN1N:48-266Chloroa_b-bind5077 → 5077.1 → 5077.1.1
37oe5mdxo1o:91-238,o:280-332MSP5084 → 5084.1 → 5084.1.1
38Oe5mdxO1O:91-238,O:280-332MSP5084 → 5084.1 → 5084.1.1
39re5mdxr1r:56-86,r:132-288Chloroa_b-bind5077 → 5077.1 → 5077.1.1
40Re5mdxR1R:56-86,R:132-288Chloroa_b-bind5077 → 5077.1 → 5077.1.1
41se5mdxs1s:59-272Chloroa_b-bind5077 → 5077.1 → 5077.1.1
42Se5mdxS1S:59-272Chloroa_b-bind5077 → 5077.1 → 5077.1.1
43te5mdxt1t:1-29PsbT3390 → 3390.1 → 3390.1.1
44Te5mdxT1T:1-29PsbT3390 → 3390.1 → 3390.1.1
45we5mdxw1w:83-128PsbW1084 → 1084.1 → 1084.1.1
46We5mdxW1W:83-128PsbW1084 → 1084.1 → 1084.1.1
47xe5mdxx1x:80-111PsbX3493 → 3493.1 → 3493.1.1
48Xe5mdxX1X:80-111PsbX3493 → 3493.1 → 3493.1.1
49ye5mdxy1y:48-266Chloroa_b-bind5077 → 5077.1 → 5077.1.1
50Ye5mdxY1Y:48-266Chloroa_b-bind5077 → 5077.1 → 5077.1.1
51ze5mdxz1z:1-61Ycf95044 → 5044.1 → 5044.1.1
52Ze5mdxZ1Z:1-61Ycf95044 → 5044.1 → 5044.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors