ECODEvolutionary Classification of Protein Domains

Home/PDB

PDB 5VK0

X-RAY DIFFRACTION1.80 Å24 chains12 ECOD domains

View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

Chain AE3 ubiquitin-protein ligase Mdm2view chain

1 domain

e5vk0A1(A:25-109)

Chain CE3 ubiquitin-protein ligase Mdm2view chain

1 domain

e5vk0C1(C:25-109)

Chain EE3 ubiquitin-protein ligase Mdm2view chain

1 domain

e5vk0E1(E:26-108)

Chain GE3 ubiquitin-protein ligase Mdm2view chain

1 domain

e5vk0G1(G:25-109)

Chain IE3 ubiquitin-protein ligase Mdm2view chain

1 domain

e5vk0I1(I:25-109)

Chain KE3 ubiquitin-protein ligase Mdm2view chain

1 domain

e5vk0K1(K:25-109)

Chain ME3 ubiquitin-protein ligase Mdm2view chain

1 domain

e5vk0M1(M:25-109)

Chain OE3 ubiquitin-protein ligase Mdm2view chain

1 domain

e5vk0O1(O:26-108)

Chain QE3 ubiquitin-protein ligase Mdm2view chain

1 domain

e5vk0Q1(Q:26-108)

Chain SE3 ubiquitin-protein ligase Mdm2view chain

1 domain

e5vk0S1(S:25-109)

Chain UE3 ubiquitin-protein ligase Mdm2view chain

1 domain

e5vk0U1(U:25-108)

Chain WE3 ubiquitin-protein ligase Mdm2view chain

1 domain

e5vk0W1(W:25-108)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5vk0A1	A:25-109	SWIB	178 → 178.1 → 178.1.1
2	C	e5vk0C1	C:25-109	SWIB	178 → 178.1 → 178.1.1
3	E	e5vk0E1	E:26-108	SWIB	178 → 178.1 → 178.1.1
4	G	e5vk0G1	G:25-109	SWIB	178 → 178.1 → 178.1.1
5	I	e5vk0I1	I:25-109	SWIB	178 → 178.1 → 178.1.1
6	K	e5vk0K1	K:25-109	SWIB	178 → 178.1 → 178.1.1
7	M	e5vk0M1	M:25-109	SWIB	178 → 178.1 → 178.1.1
8	O	e5vk0O1	O:26-108	SWIB	178 → 178.1 → 178.1.1
9	Q	e5vk0Q1	Q:26-108	SWIB	178 → 178.1 → 178.1.1
10	S	e5vk0S1	S:25-109	SWIB	178 → 178.1 → 178.1.1
11	U	e5vk0U1	U:25-108	SWIB	178 → 178.1 → 178.1.1
12	W	e5vk0W1	W:25-108	SWIB	178 → 178.1 → 178.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors