ECODEvolutionary Classification of Protein Domains

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PDB 5VMD

X-RAY DIFFRACTION2.20 Å4 chains4 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AF-box only protein 11view chain

1 domain

e5vmdA1(A:834-902)

Chain BF-box only protein 11view chain

1 domain

e5vmdB1(B:833-901)

Chain CF-box only protein 11view chain

1 domain

e5vmdC1(C:833-901)

Chain DF-box only protein 11view chain

1 domain

e5vmdD1(D:833-901)

All Domains (4)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5vmdA1	A:834-902	zf-UBR	904 → 904.2 → 904.2.1
2	B	e5vmdB1	B:833-901	zf-UBR	904 → 904.2 → 904.2.1
3	C	e5vmdC1	C:833-901	zf-UBR	904 → 904.2 → 904.2.1
4	D	e5vmdD1	D:833-901	zf-UBR	904 → 904.2 → 904.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors