ECODEvolutionary Classification of Protein Domains

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PDB 5Y6L

X-RAY DIFFRACTION2.90 Å5 chains7 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AMethionine--tRNA ligase, cytoplasmicview chain

1 domain

e5y6lA1(A:1-211)

Chain BEukaryotic translation elongation factor 1 epsilon-1view chain

1 domain

e5y6lB1(B:0-172)

Chain CBifunctional glutamate/proline--tRNA ligaseview chain

1 domain

e5y6lC1(C:2-171)

Chain DAminoacyl tRNA synthase complex-interacting multifunctional protein 2view chain

2 domains

e5y6lD1(D:106-208)e5y6lD2(D:208-321)

Chain EAspartate--tRNA ligase, cytoplasmicview chain

2 domains

e5y6lE1(E:171-243,E:268-515)e5y6lE2(E:41-170)

All Domains (7)

#	Chain	Domain ID	Range	Family	Classification
1	A	e5y6lA1	A:1-211	GST_C,GST_N_5	109 → 109.1 → 109.1.1
2	B	e5y6lB1	B:0-172	Arc1p_N_like	109 → 109.1 → 109.1.1
3	C	e5y6lC1	C:2-171	Arc1p_N_like	109 → 109.1 → 109.1.1
4	D	e5y6lD1	D:106-208	Thioredoxin_16	2485 → 2485.1 → 2485.1.1
5	D	e5y6lD2	D:208-321	GST_C	109 → 109.1 → 109.1.1
6	E	e5y6lE1	E:171-243,E:268-515	tRNA-synt_2	314 → 314.1 → 314.1.1
7	E	e5y6lE2	E:41-170	tRNA_anti-codon	2 → 2.1 → 2.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors