ECODEvolutionary Classification of Protein Domains

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PDB 6CX5

X-RAY DIFFRACTION2.40 Å4 chains7 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain AAntigen-presenting glycoprotein CD1d1view chain

2 domains

e6cx5A1(A:186-279)e6cx5A2(A:7-185)

Chain BBeta-2-microglobulinview chain

1 domain

e6cx5B1(B:2-99)

Chain CChimeric T cell antigen receptor alpha chain Va14,Va24,Ja18view chain

2 domains

e6cx5C1(C:2-115)e6cx5C2(C:116-204)

Chain DChimeric T cell antigen receptor beta chain Vb8.2, vb11view chain

2 domains

e6cx5D1(D:116-240)e6cx5D2(D:2-115)

All Domains (7)

#	Chain	Domain ID	Range	Family	Classification
1	A	e6cx5A1	A:186-279	C1-set	11 → 11.1 → 11.1.1
2	A	e6cx5A2	A:7-185	MHC_I_3	233 → 233.1 → 233.1.1
3	B	e6cx5B1	B:2-99	C1-set	11 → 11.1 → 11.1.1
4	C	e6cx5C1	C:2-115	V-set	11 → 11.1 → 11.1.1
5	C	e6cx5C2	C:116-204	DUF1968	11 → 11.1 → 11.1.1
6	D	e6cx5D1	D:116-240	C1-set	11 → 11.1 → 11.1.1
7	D	e6cx5D2	D:2-115	V-set	11 → 11.1 → 11.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors